RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 EPAS1Q99814 870 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 HERPUD2Q9BSE4 406 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 FEM1AQ9BSK4 669 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 C1QTNF1Q9BXJ1 281 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 HEMGNQ9BXL5 484 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 CHRDQ9H2X0 955 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 C10orf88Q9H8K7 445 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 ATP13A1Q9HD20 1204 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 LUC7LQ9NQ29 371 aaKnown RBP4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 TMEM248Q9NWD8 314 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 KIAA1522Q9P206 1035 aaPredicted RBP4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 SAE1Q9UBE0 346 aaPredicted RBP4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF212Q9UDV6 495 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 VPS51Q9UID3 782 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 INTUQ9ULD6 942 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 ERVW-1Q9UQF0 538 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 SLC27A6Q9Y2P4 619 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 PPP2R2CQ9Y2T4 447 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 FCF1Q9Y324 198 aaKnown RBP4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 OR51B4Q9Y5P0 310 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 STON1Q9Y6Q2 735 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 R4GN57 208 aa4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 HELZP42694 1942 aaKnown RBP4.72□□□□□ -1.65
CHMP4A-202ENST00000524955 A0A0A6YYK5 440 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 A0A1W2PQF6 199 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 C3orf70A6NLC5 250 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 F5H423 210 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 K7ESF4 209 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 PJA2O43164 708 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 MFSD11O43934 449 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 RAMP2O60895 175 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 GJB3O75712 270 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 DLDP09622 509 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 CCDC175P0C221 793 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 SP9P0CG40 484 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 SRCP12931 536 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 GABRG2P18507 467 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 IL4RP24394 825 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 NTSR1P30989 418 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 MAN1A1P33908 653 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 EIF2DP41214 584 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 RPS9P46781 194 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 CXCL12P48061 93 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 PAPOLAP51003 745 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 DGKEP52429 567 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 ST8SIA6P61647 398 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 MRPS21P82921 87 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 ARF5P84085 180 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 ECT2LQ008S8 904 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 GBE1Q04446 702 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 CCDC173Q0VFZ6 552 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 SLC10A2Q12908 348 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 DPYSQ14117 519 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 ACAP1Q15027 740 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 POLD3Q15054 466 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 DPYSL2Q16555 572 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 LPAL2Q16609 132 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 C5orf22Q49AR2 442 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 BOLA3Q53S33 107 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 ANKRD20A8PQ5CZ79 823 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 C6orf118Q5T5N4 469 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 ATXN7L2Q5T6C5 722 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 TTC39BQ5VTQ0 682 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 RNF43Q68DV7 783 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 NCBP2-AS2Q69YL0 99 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 C11orf63Q6NUN7 778 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 KIAA1324Q6UXG2 1013 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 SPOCD1Q6ZMY3 1216 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 Q6ZVU0 165 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 PEX26Q7Z412 305 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 POLNQ7Z5Q5 900 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 ADAT2Q7Z6V5 191 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 KIAA0907Q7Z7F0 614 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 NT5DC3Q86UY8 548 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 FAM124AQ86V42 546 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 ARHGAP12Q8IWW6 846 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 REXO1L1PQ8IX06 675 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 RHOT1Q8IXI2 618 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 STK40Q8N2I9 435 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 RYBPQ8N488 228 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 SPEM1Q8N4L4 309 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 FAM160A2Q8N612 972 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 PQLC3Q8N755 202 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 KIAA1958Q8N8K9 716 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 RTL3Q8N8U3 475 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 LRRC57Q8N9N7 239 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 ATP11CQ8NB49 1132 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 CHST14Q8NCH0 376 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 CCDC112Q8NEF3 446 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 TSTD1Q8NFU3 115 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 PCDH19Q8TAB3 1148 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 KIAA1524Q8TCG1 905 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 TEKT4Q8WW24 435 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 TSC1Q92574 1164 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 ALG3Q92685 438 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 ARHGEF2Q92974 986 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 MSANTD3Q96H12 275 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 MYO19Q96H55 970 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms