RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 LIMK1P53667 647 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 RPL6Q02878 288 aaKnown RBP21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 ACAP1Q15027 740 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 C9orf64Q5T6V5 341 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 ZNF776Q68DI1 518 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 USP30Q70CQ3 517 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 CYP2U1Q7Z449 544 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 SLFN11Q7Z7L1 901 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 FRMD1Q8N878 549 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 DCAF4L2Q8NA75 395 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 OR52K2Q8NGK3 314 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 TMPRSS4Q9NRS4 437 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 DLL3Q9NYJ7 618 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 ADAMTS1Q9UHI8 967 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 SLCO3A1Q9UIG8 710 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 SLC25A13Q9UJS0 675 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 VPS28Q9UK41 221 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 CYP8B1Q9UNU6 501 aa21.45■■□□□ 1.02
TRAPPC9-215ENST00000524162 RNASEH1O60930 286 aaKnown RBP21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 RHOCP08134 193 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 RHOQP17081 205 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 CTSOP43234 321 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 DHPSP49366 369 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 CLCN6P51797 869 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 RPS14P62263 151 aaKnown RBP21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 CREB5Q02930 508 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 SLC20A2Q08357 652 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 ELAVL3Q14576 367 aaKnown RBP21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 TTC31Q49AM3 519 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 TDRD12Q587J7 1177 aaKnown RBP21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 LYSMD4Q5XG99 296 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 TMC6Q7Z403 805 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 NETO1Q8TDF5 533 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 FRS2Q8WU20 508 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 PTPRN2Q92932 1015 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 DNAJC7Q99615 494 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 SLC6A17Q9H1V8 727 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 TMEM248Q9NWD8 314 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 PILRBQ9UKJ0 227 aa21.44■■□□□ 1.02
TRAPPC9-215ENST00000524162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 TMCO5BA8MYB1 307 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 ALOX15BO15296 676 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 SRGAP2O75044 1071 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 SIN3BO75182 1162 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 NDUFS2O75306 463 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 DNTTP04053 509 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 PLEKP08567 350 aaPredicted RBP21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 CASP14P31944 242 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 PTGER3P43115 390 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 ZNF33AQ06730 810 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 RAB6CQ53S08 254 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 EFHC2Q5JST6 749 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 SARM1Q6SZW1 724 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 NLRP14Q86W24 1093 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 PSTKQ8IV42 348 aaKnown RBP21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 VSTM4Q8IW00 320 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 TMEFF1Q8IYR6 380 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 CCDC185Q8N715 623 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 CEP76Q8TAP6 659 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 RAB6CQ9H0N0 254 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 MUC3BQ9H195 1237 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 DONSONQ9NYP3 566 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 MPP6Q9NZW5 540 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 CNOT8Q9UFF9 292 aaKnown RBP21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 NEU3Q9UQ49 428 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 SNX10Q9Y5X0 201 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 DNAH14Q0VDD8 3507 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 KNL1Q8NG31 2342 aa21.43■■□□□ 1.02
TRAPPC9-215ENST00000524162 TTC34A8MYJ7 566 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 LRIG2O94898 1065 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 OGDHQ02218 1023 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 SEMA3BQ13214 749 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 SH2D3CQ8N5H7 860 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 ZNF366Q8N895 744 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 C12orf50Q8NA57 414 aaPredicted RBP21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 OR8K1Q8NGG5 319 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 CPLX3Q8WVH0 158 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 DNASE2BQ8WZ79 361 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 TBC1D31Q96DN5 1066 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 TOE1Q96GM8 510 aaKnown RBP21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 RPL10LQ96L21 214 aaKnown RBP21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 PSMB7Q99436 277 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 FZD10Q9ULW2 581 aa21.42■■□□□ 1.02
TRAPPC9-215ENST00000524162 ADH1BP00325 375 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 ZNF135P52742 658 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 GNA12Q03113 381 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 PUM1Q14671 1186 aaKnown RBP eCLIP21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 WDR45BQ5MNZ6 344 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 SYCP2LQ5T4T6 812 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 SLC23A3Q6PIS1 610 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 TFAP2DQ7Z6R9 452 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 DSG4Q86SJ6 1040 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 ZNF653Q96CK0 615 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 FAM129BQ96TA1 746 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 ACE2Q9BYF1 805 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 MAGEH1Q9H213 219 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 PABPC3Q9H361 631 aaKnown RBP21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 SGK2Q9HBY8 427 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 ARHGAP20Q9P2F6 1191 aa21.41■■□□□ 1.02
TRAPPC9-215ENST00000524162 VPS51Q9UID3 782 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms