RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	SFMBT1	Q9UHJ3	866 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	PHTF1	Q9UMS5	762 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	TLR6	Q9Y2C9	796 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	STARD13	Q9Y3M8	1113 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	RPS6KL1	Q9Y6S9	549 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	PLXNA4	Q9HCM2	1894 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	OBSL1	O75147	1896 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006		E9PAM4	449 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	GLRA3	O75311	464 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	PIAS1	O75925	651 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	OAS1	P00973	400 aa	Known RBP	11	□□□□□ -0.65
SPIDR-222	ENST00000524006	JCHAIN	P01591	159 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	IGLV3-25	P01717	112 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	CSH1	P0DML2	217 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	CSH2	P0DML3	217 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	CCNC	P24863	283 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	TUB	P50607	506 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	KPNA1	P52294	538 aa	Predicted RBP	11	□□□□□ -0.65
SPIDR-222	ENST00000524006	ACTN3	Q08043	901 aa	Predicted RBP	11	□□□□□ -0.65
SPIDR-222	ENST00000524006	EFEMP1	Q12805	493 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	CDH17	Q12864	832 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	BMPR2	Q13873	1038 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	MPP2	Q14168	576 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	SLC1A5	Q15758	541 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	TAF12	Q16514	161 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	DDR2	Q16832	855 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	TEX44	Q53QW1	395 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	PLEKHG4	Q58EX7	1191 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	FAM133B	Q5BKY9	247 aa	Known RBP	11	□□□□□ -0.65
SPIDR-222	ENST00000524006	KIAA1841	Q6NSI8	718 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	ZNF449	Q6P9G9	518 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	TRAF7	Q6Q0C0	670 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	C6orf89	Q6UWU4	347 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	PRPF39	Q86UA1	669 aa	Known RBP	11	□□□□□ -0.65
SPIDR-222	ENST00000524006	CHSY1	Q86X52	802 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	LRRC49	Q8IUZ0	686 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	FAM126B	Q8IXS8	530 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	RTL3	Q8N8U3	475 aa	Known RBP	11	□□□□□ -0.65
SPIDR-222	ENST00000524006	DBF4B	Q8NFT6	615 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	OR52K1	Q8NGK4	314 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	ACMSD	Q8TDX5	336 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	CERS2	Q96G23	380 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	FAM111A	Q96PZ2	611 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	SRPK1	Q96SB4	655 aa	Known RBP	11	□□□□□ -0.65
SPIDR-222	ENST00000524006	CPNE1	Q99829	537 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	LBHD1	Q9BQE6	289 aa	Predicted RBP	11	□□□□□ -0.65
SPIDR-222	ENST00000524006	TSSK1B	Q9BXA7	367 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	IL22	Q9GZX6	179 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	VPS11	Q9H270	941 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	MANSC1	Q9H8J5	431 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	TXLNG	Q9NUQ3	528 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	MKS1	Q9NXB0	559 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	ATP11B	Q9Y2G3	1177 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	USH1C	Q9Y6N9	552 aa		11	□□□□□ -0.65
SPIDR-222	ENST00000524006	MAGEB16	A2A368	324 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	ENPP3	O14638	875 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	TNFRSF10B	O14763	440 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	ZBTB24	O43167	697 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	EDF1	O60869	148 aa	Known RBP	10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	CCNB1	P14635	433 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	PAM	P19021	973 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	FOXN2	P32314	431 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	GP5	P40197	560 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	CCNF	P41002	786 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	SCTR	P47872	440 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	SLC11A1	P49279	550 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	SERPINB8	P50452	374 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	NEK3	P51956	506 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	CRADD	P78560	199 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	NRG1	Q02297	640 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	SLC18A2	Q05940	514 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	TRIP4	Q15650	581 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	LACTB2	Q53H82	288 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	MROH9	Q5TGP6	573 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	SDHAF4	Q5VUM1	108 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	RNF43	Q68DV7	783 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	PACS1	Q6VY07	963 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	SLC39A5	Q6ZMH5	540 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	RTN4RL1	Q86UN2	441 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	NDUFAF2	Q8N183	169 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	DENND1A	Q8TEH3	1009 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	ZNF75CP	Q92670	426 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	SERAC1	Q96JX3	654 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	FAM161B	Q96MY7	647 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	TSGA13	Q96PP4	275 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	TBL1Y	Q9BQ87	522 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	TTPAL	Q9BTX7	342 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	TRIM55	Q9BYV6	548 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	ZYG11B	Q9C0D3	744 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	HIPK3	Q9H422	1215 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	PIH1D1	Q9NWS0	290 aa	Known RBP	10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	MARCH2	Q9P0N8	246 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	SLC17A7	Q9P2U7	560 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	CHD9	Q3L8U1	2897 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	ANAPC1	Q9H1A4	1944 aa		10.99	□□□□□ -0.65
SPIDR-222	ENST00000524006	CCDC195	A0A1B0GUA6	201 aa		10.98	□□□□□ -0.65
SPIDR-222	ENST00000524006	SLC12A8	A0AV02	714 aa		10.98	□□□□□ -0.65
SPIDR-222	ENST00000524006	MTMR11	A4FU01	709 aa		10.98	□□□□□ -0.65
SPIDR-222	ENST00000524006	CFAP73	A6NFT4	308 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms