RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 PEBP4Q96S96 227 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 SNRNP25Q9BV90 132 aaKnown RBP12.85□□□□□ -0.35
CCNC-216ENST00000523961 DHX35Q9H5Z1 703 aaKnown RBP12.85□□□□□ -0.35
CCNC-216ENST00000523961 CATSPERBQ9H7T0 1116 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 GPATCH2LQ9NWQ4 482 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 DONSONQ9NYP3 566 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 IMPACTQ9P2X3 320 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 SLC25A13Q9UJS0 675 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 INTUQ9ULD6 942 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 SMG5Q9UPR3 1016 aaKnown RBP12.85□□□□□ -0.35
CCNC-216ENST00000523961 NEU3Q9UQ49 428 aa12.85□□□□□ -0.35
CCNC-216ENST00000523961 A0A0D9SEW6 157 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 TARSL2A2RTX5 802 aaKnown RBP12.84□□□□□ -0.35
CCNC-216ENST00000523961 PRR23AA6NEV1 266 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 FGF10O15520 208 aaPredicted RBP12.84□□□□□ -0.35
CCNC-216ENST00000523961 ZNF217O75362 1048 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 FECHP22830 423 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 P2RY2P41231 377 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 MRE11P49959 708 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 TPI1P60174 286 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 GNA12Q03113 381 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 KIAA1324Q6UXG2 1013 aaKnown RBP12.84□□□□□ -0.35
CCNC-216ENST00000523961 CYP4V2Q6ZWL3 525 aaPredicted RBP12.84□□□□□ -0.35
CCNC-216ENST00000523961 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.84□□□□□ -0.35
CCNC-216ENST00000523961 METTL3Q86U44 580 aaKnown RBP12.84□□□□□ -0.35
CCNC-216ENST00000523961 TMPRSS6Q8IU80 811 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 RHOT2Q8IXI1 618 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 RTL3Q8N8U3 475 aaKnown RBP12.84□□□□□ -0.35
CCNC-216ENST00000523961 OR7D4Q8NG98 312 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 PRCCQ92733 491 aaPredicted RBP12.84□□□□□ -0.35
CCNC-216ENST00000523961 SIPA1Q96FS4 1042 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 PSMB7Q99436 277 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 MKRN2Q9H000 416 aaKnown RBP12.84□□□□□ -0.35
CCNC-216ENST00000523961 MAGEH1Q9H213 219 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 PRDM16Q9HAZ2 1276 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 PRSS16Q9NQE7 514 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 SLCO3A1Q9UIG8 710 aa12.84□□□□□ -0.35
CCNC-216ENST00000523961 DOCK4Q8N1I0 1966 aa12.83□□□□□ -0.35
CCNC-216ENST00000523961 EDDM13A0A1B0GTR0 161 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 WASH4PA8MWX3 477 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 TTC34A8MYJ7 566 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 GOLGA6L6A8MZA4 724 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 EEF2KO00418 725 aaKnown RBP12.83□□□□□ -0.36
CCNC-216ENST00000523961 ATP9BO43861 1147 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 GFRA3O60609 400 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 SNAP91O60641 907 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 RAMP2O60895 175 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 PROSCO94903 275 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 LCA5LO95447 670 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 IL1R2P27930 398 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 MAGEA1P43355 309 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 NUMBP49757 651 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 STK19P49842 368 aaPredicted RBP12.83□□□□□ -0.36
CCNC-216ENST00000523961 COPAP53621 1224 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 SPA17Q15506 151 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 ELF2Q15723 593 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 CA9Q16790 459 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 HADHQ16836 314 aaKnown RBP12.83□□□□□ -0.36
CCNC-216ENST00000523961 MAP7D1Q3KQU3 841 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 LAIR1Q6GTX8 287 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 RETSATQ6NUM9 610 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 ASCL5Q7RTU5 278 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 SLC35G2Q8TBE7 412 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 TEKT4Q8WW24 435 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 RLN3Q8WXF3 142 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 RFFLQ8WZ73 363 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 ZC3H10Q96K80 434 aaKnown RBP12.83□□□□□ -0.36
CCNC-216ENST00000523961 KCTD15Q96SI1 283 aaPredicted RBP12.83□□□□□ -0.36
CCNC-216ENST00000523961 SPON2Q9BUD6 331 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 ATP13A1Q9HD20 1204 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 LUC7LQ9NQ29 371 aaKnown RBP12.83□□□□□ -0.36
CCNC-216ENST00000523961 NDFIP2Q9NV92 336 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 DNAI1Q9UI46 699 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 VPS51Q9UID3 782 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 HS3ST2Q9Y278 367 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 INVSQ9Y283 1065 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 MUC22E2RYF6 1773 aaPredicted RBP12.83□□□□□ -0.36
CCNC-216ENST00000523961 CKAP5Q14008 2032 aa12.83□□□□□ -0.36
CCNC-216ENST00000523961 CXorf51AA0A1B0GTR3 108 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 CBX4O00257 560 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 DCLK1O15075 740 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 DAPK3O43293 454 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 RNASEH1O60930 286 aaKnown RBP12.82□□□□□ -0.36
CCNC-216ENST00000523961 SIN3BO75182 1162 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 MTA2O94776 668 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 RHOBTB1O94844 696 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 IPO7O95373 1038 aaKnown RBP12.82□□□□□ -0.36
CCNC-216ENST00000523961 C7P10643 843 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 ACADMP11310 421 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 MAN1A1P33908 653 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 SSR1P43307 286 aaKnown RBP12.82□□□□□ -0.36
CCNC-216ENST00000523961 HCAR3P49019 387 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 CLCN6P51797 869 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 YBEYP58557 167 aaPredicted RBP12.82□□□□□ -0.36
CCNC-216ENST00000523961 ZBTB16Q05516 673 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 SLC20A2Q08357 652 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 POLD3Q15054 466 aaPredicted RBP12.82□□□□□ -0.36
CCNC-216ENST00000523961 DPYSL2Q16555 572 aa12.82□□□□□ -0.36
CCNC-216ENST00000523961 LPAL2Q16609 132 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms