RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 SNAP91O60641 907 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 APRTP07741 180 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 TYRP14679 529 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 GDI1P31150 447 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 ZNF135P52742 658 aaPredicted RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 CDH4P55283 916 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 GNA12Q03113 381 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 TFF2Q03403 129 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 PAFAH1B3Q15102 231 aaKnown RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 ZNF77Q15935 545 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 CYP1B1Q16678 543 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 ZNF572Q7Z3I7 529 aaPredicted RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 ALLCQ8N6M5 410 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 GPR161Q8N6U8 529 aaKnown RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 NKD2Q969F2 451 aaPredicted RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 RPL10LQ96L21 214 aaKnown RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 CIPCQ9C0C6 399 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 KLC2Q9H0B6 622 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 UBE2ZQ9H832 354 aaPredicted RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 TMEM248Q9NWD8 314 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 DONSONQ9NYP3 566 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 PCYOX1Q9UHG3 505 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.56□□□□□ -0.88
SDCBP-212ENST00000523483 GREM1O60565 184 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 ITGAVP06756 1048 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 CSKP41240 450 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 MTHFRP42898 656 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 RPL21P46778 160 aaKnown RBP9.56□□□□□ -0.88
SDCBP-212ENST00000523483 ACCSLQ4AC99 568 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 MPPE1Q53F39 396 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 Q6ZNB5 142 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 ARHGAP12Q8IWW6 846 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 LZTR1Q8N653 840 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 CASKIN2Q8WXE0 1202 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 IRF7Q92985 503 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 ASIC4Q96FT7 647 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 GDE1Q9NZC3 331 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 TBC1D14Q9P2M4 693 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 TMEM265A0A087WTH1 108 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 LUC7L3O95232 432 aaKnown RBP9.56□□□□□ -0.88
SDCBP-212ENST00000523483 LAMP2P13473 410 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 PTGIRP43119 386 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 OXCT1P55809 520 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 MTA1Q13330 715 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 CTC1Q2NKJ3 1217 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 IZUMO3Q5VZ72 239 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 DENND2CQ68D51 928 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 TMEM184AQ6ZMB5 413 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 NLRP14Q86W24 1093 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 CCDC13Q8IYE1 715 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 C12orf50Q8NA57 414 aaPredicted RBP9.56□□□□□ -0.88
SDCBP-212ENST00000523483 SMRP1Q8NCR6 262 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 PWWP2AQ96N64 755 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 S1PR5Q9H228 398 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 NT5MQ9NPB1 228 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 ZDHHC4Q9NPG8 344 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 SPHK2Q9NRA0 654 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 RBM22Q9NW64 420 aaKnown RBP eCLIP9.56□□□□□ -0.88
SDCBP-212ENST00000523483 THG1LQ9NWX6 298 aaKnown RBP9.56□□□□□ -0.88
SDCBP-212ENST00000523483 ZNF510Q9Y2H8 683 aa9.56□□□□□ -0.88
SDCBP-212ENST00000523483 MYBL2P10244 700 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 CCNB1P14635 433 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 HOXD9P28356 352 aaPredicted RBP9.55□□□□□ -0.88
SDCBP-212ENST00000523483 RPL22P35268 128 aaKnown RBP9.55□□□□□ -0.88
SDCBP-212ENST00000523483 CAPN12Q6ZSI9 719 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 VSIG1Q86XK7 387 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 ZNF683Q8IZ20 524 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 QKIQ96PU8 341 aaKnown RBP eCLIP9.55□□□□□ -0.88
SDCBP-212ENST00000523483 NOL6Q9H6R4 1146 aaKnown RBP9.55□□□□□ -0.88
SDCBP-212ENST00000523483 PPARGC1AQ9UBK2 798 aaKnown RBP9.55□□□□□ -0.88
SDCBP-212ENST00000523483 SHROOM3Q8TF72 1996 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 IGLV3-10A0A075B6K4 115 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 SLC9A3R1O14745 358 aaPredicted RBP9.55□□□□□ -0.88
SDCBP-212ENST00000523483 STIP1P31948 543 aaKnown RBP9.55□□□□□ -0.88
SDCBP-212ENST00000523483 CD70P32970 193 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 GALNT2Q10471 571 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 ZBTB17Q13105 803 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 ZNF235Q14590 738 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 PCSK7Q16549 785 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 RHBDF2Q6PJF5 856 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 ADGRG2Q8IZP9 1017 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 RYBPQ8N488 228 aaPredicted RBP9.55□□□□□ -0.88
SDCBP-212ENST00000523483 FBXO25Q8TCJ0 367 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 RUNDC3BQ96NL0 473 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 OLFM3Q96PB7 478 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 APOL2Q9BQE5 337 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 TM6SF2Q9BZW4 377 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 BRD9Q9H8M2 597 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 LIMD1Q9UGP4 676 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 RSPH14Q9UHP6 348 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 NUMBLQ9Y6R0 609 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 C2orf16Q68DN1 1984 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 FAM187AA6NFU0 413 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 DRGXA6NNA5 263 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 ZNF487B1APH4 448 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 NCAM2O15394 837 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 USP12O75317 370 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 ASGR2P07307 311 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 PSMB4P28070 264 aa9.55□□□□□ -0.88
SDCBP-212ENST00000523483 ITGA8P53708 1063 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms