RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TSSK4Q6SA08 328 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 CHST9Q7L1S5 443 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 RFX6Q8HWS3 928 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 SFTPA1Q8IWL2 248 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 RTL3Q8N8U3 475 aaKnown RBP12.25□□□□□ -0.45
PVT1-215ENST00000522963 ZNF592Q92610 1267 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 PBKQ96KB5 322 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 MAK16Q9BXY0 300 aaKnown RBP12.25□□□□□ -0.45
PVT1-215ENST00000522963 OSBPL8Q9BZF1 889 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 KCNH6Q9H252 994 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 CATSPERBQ9H7T0 1116 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 NDFIP2Q9NV92 336 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 TMEM248Q9NWD8 314 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 DEC1Q9P2X7 70 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 CLEC4EQ9ULY5 219 aa12.25□□□□□ -0.45
PVT1-215ENST00000522963 ANTXRLA6NF34 631 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.24□□□□□ -0.45
PVT1-215ENST00000522963 ZNF185O15231 689 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 HOXC11O43248 304 aaPredicted RBP12.24□□□□□ -0.45
PVT1-215ENST00000522963 CLDN11O75508 207 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 LUC7L3O95232 432 aaKnown RBP12.24□□□□□ -0.45
PVT1-215ENST00000522963 KAT7O95251 611 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 TCP1P17987 556 aaKnown RBP12.24□□□□□ -0.45
PVT1-215ENST00000522963 DYNLT1P63172 113 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 SATB1Q01826 763 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 MESP2Q0VG99 397 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 NCBP2-AS2Q69YL0 99 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 SLC9A4Q6AI14 798 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 GRAMD4Q6IC98 578 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 PKN3Q6P5Z2 889 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 RASGEF1CQ8N431 466 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 CARNMT1Q8N4J0 409 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 NPWQ8N729 165 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 PLD5Q8N7P1 536 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 RPLP0P6Q8NHW5 317 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 WFDC5Q8TCV5 224 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 MS4A14Q96JA4 679 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 KLC2Q9H0B6 622 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 ZDHHC4Q9NPG8 344 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 POLR3BQ9NW08 1133 aaPredicted RBP12.24□□□□□ -0.45
PVT1-215ENST00000522963 EFR3BQ9Y2G0 817 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 SAR1BQ9Y6B6 198 aa12.24□□□□□ -0.45
PVT1-215ENST00000522963 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.23□□□□□ -0.45
PVT1-215ENST00000522963 TCRBV7S2A1N4TA0A589 114 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 H0Y626 953 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 CES2O00748 559 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 APOL1O14791 398 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 CST8O60676 142 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 TIE1P35590 1138 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 GRIA2P42262 883 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 CXCL12P48061 93 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 MAPKAPK2P49137 400 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 DGKGP49619 791 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 CCR3P51677 355 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 KLF1Q13351 362 aaPredicted RBP12.23□□□□□ -0.45
PVT1-215ENST00000522963 ZNF177Q13360 481 aaPredicted RBP12.23□□□□□ -0.45
PVT1-215ENST00000522963 TFDP2Q14188 446 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 PAFAH1B3Q15102 231 aaKnown RBP12.23□□□□□ -0.45
PVT1-215ENST00000522963 FBXO43Q4G163 708 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 FSCBQ5H9T9 825 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 EMC10Q5UCC4 262 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 HEATR6Q6AI08 1181 aaKnown RBP12.23□□□□□ -0.45
PVT1-215ENST00000522963 CXorf57Q6NSI4 855 aaKnown RBP12.23□□□□□ -0.45
PVT1-215ENST00000522963 TMCO3Q6UWJ1 677 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 NPNTQ6UXI9 565 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 BBS12Q6ZW61 710 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 SLC13A5Q86YT5 568 aaPredicted RBP12.23□□□□□ -0.45
PVT1-215ENST00000522963 MFN1Q8IWA4 741 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 TP53INP2Q8IXH6 220 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 SYNPOQ8N3V7 929 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 SPEM1Q8N4L4 309 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 CCDC33Q8N5R6 958 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 NETO2Q8NC67 525 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 OR52K2Q8NGK3 314 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.23□□□□□ -0.45
PVT1-215ENST00000522963 EZH1Q92800 747 aaPredicted RBP12.23□□□□□ -0.45
PVT1-215ENST00000522963 CELF6Q96J87 481 aaKnown RBP12.23□□□□□ -0.45
PVT1-215ENST00000522963 RETREG1Q9H6L5 497 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 NOL6Q9H6R4 1146 aaKnown RBP12.23□□□□□ -0.45
PVT1-215ENST00000522963 C2orf42Q9NWW7 574 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 SMARCAL1Q9NZC9 954 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 FBXO10Q9UK96 956 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 TBC1D30Q9Y2I9 924 aa12.23□□□□□ -0.45
PVT1-215ENST00000522963 K7EQS6 105 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 MFSD11O43934 449 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 CACNG3O60359 315 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 TJP3O95049 919 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 FGGP02679 453 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 RHOCP08134 193 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 SP9P0CG40 484 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 ZFXP17010 805 aaPredicted RBP12.22□□□□□ -0.45
PVT1-215ENST00000522963 OR1E1P30953 314 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 EIF2DP41214 584 aaKnown RBP12.22□□□□□ -0.45
PVT1-215ENST00000522963 NHLH1Q02575 133 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 GBE1Q04446 702 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 SLC10A2Q12908 348 aaPredicted RBP12.22□□□□□ -0.45
PVT1-215ENST00000522963 CDH18Q13634 790 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 PREPLQ4J6C6 727 aaPredicted RBP12.22□□□□□ -0.45
PVT1-215ENST00000522963 AFMIDQ63HM1 303 aa12.22□□□□□ -0.45
PVT1-215ENST00000522963 NUDT18Q6ZVK8 323 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms