RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 DNTTP04053 509 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 HMBSP08397 361 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 ABCB4P21439 1286 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 ADORA2BP29275 332 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 MYL6P60660 151 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 SNRPFP62306 86 aaKnown RBP6.53□□□□□ -1.36
PABPC1-220ENST00000522658 CYP4F3Q08477 520 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 PSMD6Q15008 389 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 STK38Q15208 465 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 HLA-BQ31612 363 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 FUT11Q495W5 492 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 SOWAHCQ53LP3 525 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-220ENST00000522658 HTR3DQ70Z44 454 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 ACOT1Q86TX2 421 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 MIB1Q86YT6 1006 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 TMPRSS6Q8IU80 811 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 CCDC117Q8IWD4 279 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-220ENST00000522658 SCAMP5Q8TAC9 235 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 GOLGA5Q8TBA6 731 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 PIP4K2CQ8TBX8 421 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 DDI1Q8WTU0 396 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 DNAJC19Q96DA6 116 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 CLIC6Q96NY7 704 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 KCNK16Q96T55 309 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 ACOX2Q99424 681 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 ARID3AQ99856 593 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 DUSP9Q99956 384 aaKnown RBP6.53□□□□□ -1.36
PABPC1-220ENST00000522658 PANK2Q9BZ23 570 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 PCED1AQ9H1Q7 454 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 LHX5Q9H2C1 402 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 SMYD3Q9H7B4 428 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 AGPAT3Q9NRZ7 376 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 FAM49BQ9NUQ9 324 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 C19orf73Q9NVV2 129 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 WSB2Q9NYS7 404 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-220ENST00000522658 PLK2Q9NYY3 685 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 USP36Q9P275 1121 aaKnown RBP6.53□□□□□ -1.36
PABPC1-220ENST00000522658 CGNQ9P2M7 1197 aaKnown RBP6.53□□□□□ -1.36
PABPC1-220ENST00000522658 EIF2B4Q9UI10 523 aaKnown RBP6.53□□□□□ -1.36
PABPC1-220ENST00000522658 PPM1HQ9ULR3 514 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.53□□□□□ -1.36
PABPC1-220ENST00000522658 NCKAP1Q9Y2A7 1128 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 PCDHGB2Q9Y5G2 931 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 PCDHA5Q9Y5H7 936 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 SRPRBQ9Y5M8 271 aaKnown RBP6.53□□□□□ -1.36
PABPC1-220ENST00000522658 CLIC4Q9Y696 253 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 AK5Q9Y6K8 562 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 IGF2RP11717 2491 aa6.53□□□□□ -1.36
PABPC1-220ENST00000522658 ADAMTS9Q9P2N4 1935 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 ASCC3Q8N3C0 2202 aaKnown RBP6.52□□□□□ -1.37
PABPC1-220ENST00000522658 A0A1B0GVT2 93 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 FRMD3A2A2Y4 597 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 CAPN8A6NHC0 703 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 TRIM24O15164 1050 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 DFNA5O60443 496 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 RNASEH1O60930 286 aaKnown RBP6.52□□□□□ -1.37
PABPC1-220ENST00000522658 GJB3O75712 270 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 LRIG2O94898 1065 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 SLITRK5O94991 958 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 FSBPO95073 299 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 RARGP13631 454 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 CCDC130P13994 396 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 JUPP14923 745 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 ACO1P21399 889 aaKnown RBP6.52□□□□□ -1.37
PABPC1-220ENST00000522658 GSTT1P30711 240 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 CORO1AP31146 461 aaKnown RBP6.52□□□□□ -1.37
PABPC1-220ENST00000522658 TPMTP51580 245 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 CACNA2D1P54289 1103 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 BCAT1P54687 386 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 ST8SIA6P61647 398 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 COG7P83436 770 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 MLANAQ16655 118 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 SLC45A4Q5BKX6 768 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 SNX30Q5VWJ9 437 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 C22orf34Q6ZV56 151 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 TMPRSS7Q7RTY8 843 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 C1QL4Q86Z23 238 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 ARHGAP18Q8N392 663 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 KCT2Q8NC54 265 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 CXorf38Q8TB03 319 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 SLC2A14Q8TDB8 520 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 DNASE2BQ8WZ79 361 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 DHX58Q96C10 678 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 LIN37Q96GY3 246 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-220ENST00000522658 STRA6Q9BX79 667 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 ACE2Q9BYF1 805 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-220ENST00000522658 TRIM9Q9C026 710 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 CEP44Q9C0F1 390 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 BTBD1Q9H0C5 482 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 FBRSQ9HAH7 460 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 MAGEF1Q9HAY2 307 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 KIAA1522Q9P206 1035 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-220ENST00000522658 FBXO2Q9UK22 296 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-220ENST00000522658 PLA2G4CQ9UP65 541 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 SCML2Q9UQR0 700 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 FRMD4BQ9Y2L6 1034 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 ADAMTS20P59510 1910 aa6.52□□□□□ -1.37
PABPC1-220ENST00000522658 PCDH15Q96QU1 1955 aa6.51□□□□□ -1.37
PABPC1-220ENST00000522658 PTPRDP23468 1912 aa6.51□□□□□ -1.37
PABPC1-220ENST00000522658 CEP192Q8TEP8 1941 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms