RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 LRRC4Q9HBW1 653 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 ITM2CQ9NQX7 267 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 RMND1Q9NWS8 449 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 THAP10Q9P2Z0 257 aaPredicted RBP8.36□□□□□ -1.07
PVT1-213ENST00000522414 ARMCX3Q9UH62 379 aaPredicted RBP8.36□□□□□ -1.07
PVT1-213ENST00000522414 STRIP2Q9ULQ0 834 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 PKD1L2Q7Z442 2459 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 CEP192Q8TEP8 1941 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 O00370 1275 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 XPO1O14980 1071 aaKnown RBP8.35□□□□□ -1.07
PVT1-213ENST00000522414 MSI1O43347 362 aaKnown RBP8.35□□□□□ -1.07
PVT1-213ENST00000522414 SH3BP5O60239 455 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 SYNCRIPO60506 623 aaKnown RBP8.35□□□□□ -1.07
PVT1-213ENST00000522414 SMC2O95347 1197 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 PROS1P07225 676 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 CD59P13987 128 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 BMP6P22004 513 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 PRKCHP24723 683 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 CD6P30203 668 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 SCNN1AP37088 669 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 HARS2P49590 506 aaKnown RBP8.35□□□□□ -1.07
PVT1-213ENST00000522414 TPMTP51580 245 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 SIM1P81133 766 aaPredicted RBP8.35□□□□□ -1.07
PVT1-213ENST00000522414 ENPP2Q13822 863 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 ZNF234Q14588 700 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 PLEKHG6Q3KR16 790 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 PMF1Q6P1K2 205 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 TMEM270Q6UE05 265 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 RRAGAQ7L523 313 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 FAM124AQ86V42 546 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 HDDC3Q8N4P3 179 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 MINDY1Q8N5J2 469 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 UBR7Q8N806 425 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 ZNF366Q8N895 744 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 RBBP8NLQ8NC74 664 aaPredicted RBP8.35□□□□□ -1.07
PVT1-213ENST00000522414 SLC35F5Q8WV83 523 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 SMARCE1Q969G3 411 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 TMA16Q96EY4 203 aaKnown RBP8.35□□□□□ -1.07
PVT1-213ENST00000522414 SIPA1Q96FS4 1042 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 GSDMAQ96QA5 445 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 MIR1-1HGQ9H1L0 117 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 SLC32A1Q9H598 525 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 WSB2Q9NYS7 404 aaPredicted RBP8.35□□□□□ -1.07
PVT1-213ENST00000522414 MAN1B1Q9UKM7 699 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 HIF3AQ9Y2N7 669 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 PCDHB4Q9Y5E5 795 aa8.35□□□□□ -1.07
PVT1-213ENST00000522414 NBEAQ8NFP9 2946 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 SLC16A3O15427 465 aaKnown RBP8.34□□□□□ -1.07
PVT1-213ENST00000522414 TIMM44O43615 452 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 OPHN1O60890 802 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 CYBBP04839 570 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 EPHX1P07099 455 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 VDRP11473 427 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 NCAM1P13591 858 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 BRD2P25440 801 aaKnown RBP8.34□□□□□ -1.07
PVT1-213ENST00000522414 MAP4P27816 1152 aaKnown RBP8.34□□□□□ -1.07
PVT1-213ENST00000522414 HOXD9P28356 352 aaPredicted RBP8.34□□□□□ -1.07
PVT1-213ENST00000522414 HLA-FP30511 346 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 HOXD12P35452 270 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 FMO5P49326 533 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 SGSHP51688 502 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 COPAP53621 1224 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 BCAT1P54687 386 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 DAOAP59103 153 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 BST2Q10589 180 aaKnown RBP8.34□□□□□ -1.07
PVT1-213ENST00000522414 STARD3Q14849 445 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 NUMA1Q14980 2115 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 CNGA2Q16280 664 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 MPPE1Q53F39 396 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 SYCP2LQ5T4T6 812 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 ADGRF1Q5T601 910 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 KLHL10Q6JEL2 608 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 RFWD3Q6PCD5 774 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 LCLAT1Q6UWP7 414 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 UNQ6494/PRO21346Q6UXR6 183 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 ANKS1BQ7Z6G8 1248 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 ADIPOR2Q86V24 386 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 FAM217AQ8IXS0 508 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 SIX6OS1Q8N1H7 587 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 CPXM2Q8N436 756 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 CHCHD4Q8N4Q1 142 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 PNPLA1Q8N8W4 532 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 LMO3Q8TAP4 145 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 CLEC4CQ8WTT0 213 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 KCTD13Q8WZ19 329 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 DNASE2BQ8WZ79 361 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 PRCCQ92733 491 aaPredicted RBP8.34□□□□□ -1.07
PVT1-213ENST00000522414 MYEOVQ96EZ4 313 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 CCDC34Q96HJ3 373 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 SLC2A11Q9BYW1 496 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 MIS12Q9H081 205 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 MTG2Q9H4K7 406 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 IL21RQ9HBE5 538 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 ABCC13Q9NSE7 274 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 ABCB8Q9NUT2 735 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 USP36Q9P275 1121 aaKnown RBP8.34□□□□□ -1.07
PVT1-213ENST00000522414 HESX1Q9UBX0 185 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 EIF2B4Q9UI10 523 aaKnown RBP8.34□□□□□ -1.07
PVT1-213ENST00000522414 KIAA1257Q9ULG3 409 aa8.34□□□□□ -1.07
PVT1-213ENST00000522414 ZMIZ1Q9ULJ6 1067 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms