RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CDH4P55283 916 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 ELAVL3Q14576 367 aaKnown RBP21.28■■□□□ 1
SDCBP-209ENST00000522243 SLC25A52Q3SY17 297 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 C5orf22Q49AR2 442 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 FKBP15Q5T1M5 1219 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 SASS6Q6UVJ0 657 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 LRSAM1Q6UWE0 723 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 MSANTD4Q8NCY6 345 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 FRS2Q8WU20 508 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 PGAP3Q96FM1 320 aaPredicted RBP21.28■■□□□ 1
SDCBP-209ENST00000522243 CFAP57Q96MR6 1250 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 MUC3BQ9H195 1237 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 EBF2Q9HAK2 575 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 TMEM59LQ9UK28 342 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 NOCTQ9UK39 431 aaKnown RBP21.28■■□□□ 1
SDCBP-209ENST00000522243 ANKRD6Q9Y2G4 727 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 OR51B4Q9Y5P0 310 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 TP53BP1Q12888 1972 aaPredicted RBP21.28■■□□□ 1
SDCBP-209ENST00000522243 LRRC72A6NJI9 287 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 BNIP3LO60238 219 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 ADH1BP00325 375 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 F9P00740 461 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 CHRNB2P17787 502 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 GRIA4P48058 902 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 COPB1P53618 953 aaKnown RBP21.27■■□□□ 1
SDCBP-209ENST00000522243 HNRNPDQ14103 355 aaKnown RBP21.27■■□□□ 1
SDCBP-209ENST00000522243 DLG2Q15700 870 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 KCNT1Q5JUK3 1230 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 UNQ6494/PRO21346Q6UXR6 183 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.27■■□□□ 1
SDCBP-209ENST00000522243 ADAT2Q7Z6V5 191 aaKnown RBP21.27■■□□□ 1
SDCBP-209ENST00000522243 ZNF683Q8IZ20 524 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 CHCHD4Q8N4Q1 142 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 EMC1Q8N766 993 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 OR14C36Q8NHC7 312 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 PCMTD1Q96MG8 357 aaPredicted RBP21.27■■□□□ 1
SDCBP-209ENST00000522243 SLC6A18Q96N87 628 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 OSGEPQ9NPF4 335 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 METTL5Q9NRN9 209 aaKnown RBP21.27■■□□□ 1
SDCBP-209ENST00000522243 MPP6Q9NZW5 540 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 ADAMTS1Q9UHI8 967 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 KLK13Q9UKR3 277 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 FZD4Q9ULV1 537 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 TBC1D30Q9Y2I9 924 aa21.27■■□□□ 1
SDCBP-209ENST00000522243 TPRP12270 2363 aaKnown RBP21.26■□□□□ 0.99
SDCBP-209ENST00000522243 A0A1W2PPC4 97 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 ATP9BO43861 1147 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 SNAP91O60641 907 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 RHOCP08134 193 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 GOT1P17174 413 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 SOX5P35711 763 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 JAM2P57087 298 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 FMO1Q01740 532 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 POM121L1PQ3SYA9 428 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 Q6ZVU0 165 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 TFAP2DQ7Z6R9 452 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 FAM131BQ86XD5 332 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 OR2T34Q8NGX1 318 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 OR8D1Q8WZ84 308 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 SPAG5Q96R06 1193 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 PSMB7Q99436 277 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 ANO10Q9NW15 660 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 SARDHQ9UL12 918 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 SIK3Q9Y2K2 1263 aa21.26■□□□□ 0.99
SDCBP-209ENST00000522243 E9PAM4 449 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 SRGAP2O75044 1071 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 CYP1A1P04798 512 aaPredicted RBP21.25■□□□□ 0.99
SDCBP-209ENST00000522243 PROS1P07225 676 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 ZNF883P0CG24 379 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 RDXP35241 583 aaKnown RBP21.25■□□□□ 0.99
SDCBP-209ENST00000522243 DRD3P35462 400 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 ADPRHP54922 357 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 ATP11AP98196 1134 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 CDR2Q01850 454 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 SYCP1Q15431 976 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 RAB6CQ53S08 254 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 LRRC31Q6UY01 552 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 ZNF677Q86XU0 584 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 SH2D3CQ8N5H7 860 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 PNPLA1Q8N8W4 532 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 SLC30A5Q8TAD4 765 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 C11orf70Q9BRQ4 267 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 RAB6CQ9H0N0 254 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 PCOLCE2Q9UKZ9 415 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 PAXBP1Q9Y5B6 917 aa21.25■□□□□ 0.99
SDCBP-209ENST00000522243 TBC1D3DA0A087WVF3 549 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 TBC1D3IA0A087WXS9 549 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 TBC1D3EA0A087X179 549 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 TBC1D3KA0A087X1G2 549 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 TBC1D3FA6NER0 549 aaPredicted RBP21.24■□□□□ 0.99
SDCBP-209ENST00000522243 DRGXA6NNA5 263 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 TBC1D3LB9A6J9 549 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 H0Y8X5 98 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 GOLGA6L22H0YM25 854 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 CBFA2T3O75081 653 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 GJB6O95452 261 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 MT-CO1P00395 513 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 TBC1D3HP0C7X1 549 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 SRCP12931 536 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 STAT1P42224 750 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms