RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 KCNH2Q12809 1159 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 MTA1Q13330 715 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 EIF4EBP2Q13542 120 aaPredicted RBP15.34■□□□□ 0.05
PRKDC-204ENST00000521331 HES3Q5TGS1 186 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 SFMBT2Q5VUG0 894 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 TTI2Q6NXR4 508 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 ELOA2Q8IYF1 753 aaPredicted RBP15.34■□□□□ 0.05
PRKDC-204ENST00000521331 CCAR2Q8N163 923 aaKnown RBP15.34■□□□□ 0.05
PRKDC-204ENST00000521331 PRMT1Q99873 361 aaKnown RBP15.34■□□□□ 0.05
PRKDC-204ENST00000521331 NRSN2Q9GZP1 204 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 CYTH4Q9UIA0 394 aa15.34■□□□□ 0.05
PRKDC-204ENST00000521331 TMEM131Q92545 1883 aa15.33■□□□□ 0.05
PRKDC-204ENST00000521331 PLRG1O43660 514 aaKnown RBP15.33■□□□□ 0.04
PRKDC-204ENST00000521331 LETM1O95202 739 aaPredicted RBP15.33■□□□□ 0.04
PRKDC-204ENST00000521331 AFPP02771 609 aaKnown RBP15.33■□□□□ 0.04
PRKDC-204ENST00000521331 CKMT2P17540 419 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 CCR1P32246 355 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 CDK17Q00537 523 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 TARDBPQ13148 414 aaKnown RBP eCLIP15.33■□□□□ 0.04
PRKDC-204ENST00000521331 KLHL10Q6JEL2 608 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 FBXL19Q6PCT2 694 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 LRRC69Q6ZNQ3 347 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 ENOSF1Q7L5Y1 443 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 TRIM69Q86WT6 500 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 TRIM59Q8IWR1 403 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 CACTIN-AS1Q8N1I8 211 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 NELFBQ8WX92 580 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 ZNF606Q8WXB4 792 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 UBL7Q96S82 380 aaPredicted RBP15.33■□□□□ 0.04
PRKDC-204ENST00000521331 INTS2Q9H0H0 1204 aaKnown RBP15.33■□□□□ 0.04
PRKDC-204ENST00000521331 FAM204AQ9H8W3 233 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 ARHGAP20Q9P2F6 1191 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 SLC25A13Q9UJS0 675 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 MAN1B1Q9UKM7 699 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.33■□□□□ 0.04
PRKDC-204ENST00000521331 AK5Q9Y6K8 562 aa15.33■□□□□ 0.04
PRKDC-204ENST00000521331 C1QTNF3-AMACRE9PGA6 284 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 ALOX15BO15296 676 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 RRP8O43159 456 aaKnown RBP15.32■□□□□ 0.04
PRKDC-204ENST00000521331 THAP12O43422 761 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 ATP9BO43861 1147 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 RTN2O75298 545 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 GLI1P08151 1106 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 VAV1P15498 845 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 GNA15P30679 374 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 MARSP56192 900 aaKnown RBP15.32■□□□□ 0.04
PRKDC-204ENST00000521331 BNIP3Q12983 259 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 PDCLQ13371 301 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 STAT4Q14765 748 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 RTP5Q14D33 572 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 SETMARQ53H47 684 aaPredicted RBP15.32■□□□□ 0.04
PRKDC-204ENST00000521331 ISM2Q6H9L7 571 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 CXorf57Q6NSI4 855 aaKnown RBP15.32■□□□□ 0.04
PRKDC-204ENST00000521331 KANSL1Q7Z3B3 1105 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 CIR1Q86X95 450 aaPredicted RBP15.32■□□□□ 0.04
PRKDC-204ENST00000521331 SPATS2Q86XZ4 545 aaKnown RBP15.32■□□□□ 0.04
PRKDC-204ENST00000521331 PIP4K2CQ8TBX8 421 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 BAP1Q92560 729 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 RNF34Q969K3 372 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 FAM81BQ96LP2 452 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 UBE2TQ9NPD8 197 aaPredicted RBP15.32■□□□□ 0.04
PRKDC-204ENST00000521331 ASNSD1Q9NWL6 643 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 DDIT4Q9NX09 232 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 PPM1HQ9ULR3 514 aa15.32■□□□□ 0.04
PRKDC-204ENST00000521331 GCN1Q92616 2671 aaKnown RBP15.31■□□□□ 0.04
PRKDC-204ENST00000521331 PLXNA2O75051 1894 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 PRAMEF26H0Y7S4 382 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 RNGTTO60942 597 aaKnown RBP15.31■□□□□ 0.04
PRKDC-204ENST00000521331 MAT2AP31153 395 aaKnown RBP15.31■□□□□ 0.04
PRKDC-204ENST00000521331 EIF2S3P41091 472 aaKnown RBP15.31■□□□□ 0.04
PRKDC-204ENST00000521331 CLDN6P56747 220 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 PITX1P78337 314 aaPredicted RBP15.31■□□□□ 0.04
PRKDC-204ENST00000521331 SEMG2Q02383 582 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 ACCSLQ4AC99 568 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 AGBL4Q5VU57 503 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 FBXL22Q6P050 247 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 RFFLQ8WZ73 363 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 CRELD1Q96HD1 420 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 RPRD1AQ96P16 312 aaPredicted RBP15.31■□□□□ 0.04
PRKDC-204ENST00000521331 SLC2A13Q96QE2 648 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 FEM1AQ9BSK4 669 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 PREBQ9HCU5 417 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 SARDHQ9UL12 918 aa15.31■□□□□ 0.04
PRKDC-204ENST00000521331 SYNJ2BP-COX16A0A087WUM0 186 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.3■□□□□ 0.04
PRKDC-204ENST00000521331 PPP1R3GB7ZBB8 358 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 TK2O00142 265 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 MCF2LO15068 1137 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 HSF2BPO75031 334 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 ZNF18P17022 549 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 ACP1P24666 158 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 NUMBP49757 651 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 METAP1P53582 386 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 CCDC15Q0P6D6 951 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 CNTN1Q12860 1018 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 ZNF177Q13360 481 aaPredicted RBP15.3■□□□□ 0.04
PRKDC-204ENST00000521331 TAF5Q15542 800 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 DLG2Q15700 870 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 EFHC1Q5JVL4 640 aa15.3■□□□□ 0.04
PRKDC-204ENST00000521331 DEFB106AQ8N104 65 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms