RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 A0A087X0T9 212 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 A0A0D9SEW6 157 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 EDDM13A0A1B0GTR0 161 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 TARSL2A2RTX5 802 aaKnown RBP21.19■□□□□ 0.98
TRIM35-203ENST00000521253 LRIG2O94898 1065 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 ZNF806P0C7X5 589 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 FAM228BP0C875 321 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 DESP17661 470 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 CD6P30203 668 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 NNMTP40261 264 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 RPS14P62263 151 aaKnown RBP21.19■□□□□ 0.98
TRIM35-203ENST00000521253 ZNF252P-AS1Q0IIN9 211 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 RWDD4Q6NW29 188 aaKnown RBP21.19■□□□□ 0.98
TRIM35-203ENST00000521253 PRR23CQ6ZRP0 262 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 CYP2U1Q7Z449 544 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 PYROXD2Q8N2H3 581 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 TOE1Q96GM8 510 aaKnown RBP21.19■□□□□ 0.98
TRIM35-203ENST00000521253 RSPH9Q9H1X1 276 aaPredicted RBP21.19■□□□□ 0.98
TRIM35-203ENST00000521253 WSB2Q9NYS7 404 aaPredicted RBP21.19■□□□□ 0.98
TRIM35-203ENST00000521253 SLC25A13Q9UJS0 675 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 SCINQ9Y6U3 715 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 PLXND1Q9Y4D7 1925 aa21.19■□□□□ 0.98
TRIM35-203ENST00000521253 SNAP91O60641 907 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 IGLV3-19P01714 112 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 VAV1P15498 845 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 VASPP50552 380 aaPredicted RBP21.18■□□□□ 0.98
TRIM35-203ENST00000521253 LMNB2Q03252 620 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 SF3A2Q15428 464 aaKnown RBP21.18■□□□□ 0.98
TRIM35-203ENST00000521253 EFHC2Q5JST6 749 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 LYSMD4Q5XG99 296 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 ZNF776Q68DI1 518 aaPredicted RBP21.18■□□□□ 0.98
TRIM35-203ENST00000521253 NLRP14Q86W24 1093 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 DRC7Q8IY82 874 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 FNIP1Q8TF40 1166 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 PIGKQ92643 395 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 PTPRN2Q92932 1015 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 TBC1D31Q96DN5 1066 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 DNAJC7Q99615 494 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 C2orf49Q9BVC5 232 aaPredicted RBP21.18■□□□□ 0.98
TRIM35-203ENST00000521253 VPS45Q9NRW7 570 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 FZD10Q9ULW2 581 aa21.18■□□□□ 0.98
TRIM35-203ENST00000521253 DCHS1Q96JQ0 3298 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 ILVBLA1L0T0 632 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 ATP9BO43861 1147 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 NDUFS2O75306 463 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 RHOQP17081 205 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 OXTRP30559 389 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 L1CAMP32004 1257 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 AIF1P55008 147 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 KRT83P78385 493 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 ZBTB16Q05516 673 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 ZNF783Q6ZMS7 281 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 SLC41A1Q8IVJ1 513 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 ARFGAP1Q8N6T3 406 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 DCAF4L2Q8NA75 395 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 OR7D4Q8NG98 312 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 OR8K1Q8NGG5 319 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 FRS2Q8WU20 508 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 THAP2Q9H0W7 228 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 MRPL47Q9HD33 250 aaKnown RBP21.17■□□□□ 0.98
TRIM35-203ENST00000521253 NDFIP2Q9NV92 336 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 VPS51Q9UID3 782 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 THADAQ6YHU6 1953 aa21.17■□□□□ 0.98
TRIM35-203ENST00000521253 MT-CO1P00395 513 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 DNTTP04053 509 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 ITPKAP23677 461 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 EIF4A3P38919 411 aaKnown RBP21.16■□□□□ 0.98
TRIM35-203ENST00000521253 ZNF33AQ06730 810 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 TCEAL6Q6IPX3 200 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 ALKBH5Q6P6C2 394 aaKnown RBP21.16■□□□□ 0.98
TRIM35-203ENST00000521253 SARM1Q6SZW1 724 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 FAM124AQ86V42 546 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 STK40Q8N2I9 435 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 SH2D3CQ8N5H7 860 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 TCEAL3Q969E4 200 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 HSPA12BQ96MM6 686 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 FAM129BQ96TA1 746 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 SPON2Q9BUD6 331 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 GPR174Q9BXC1 333 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 RETREG1Q9H6L5 497 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 TMEM74BQ9NUR3 256 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 TMEM248Q9NWD8 314 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 NENFQ9UMX5 172 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 HS3ST2Q9Y278 367 aa21.16■□□□□ 0.98
TRIM35-203ENST00000521253 GON4LQ3T8J9 2241 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 ATXN2Q99700 1313 aaKnown RBP21.15■□□□□ 0.98
TRIM35-203ENST00000521253 PRR5-ARHGAP8B1AHC4 643 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 FOXD2O60548 495 aaPredicted RBP21.15■□□□□ 0.98
TRIM35-203ENST00000521253 RNASEH1O60930 286 aaKnown RBP21.15■□□□□ 0.98
TRIM35-203ENST00000521253 TPM1P09493 284 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 GLDCP23378 1020 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 MAPKAPK2P49137 400 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 ARHGAP8P85298 464 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 GNA12Q03113 381 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 DLG2Q15700 870 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 ACCSLQ4AC99 568 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 CCDC122Q5T0U0 273 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 LINGO4Q6UY18 593 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 SYT12Q8IV01 421 aa21.15■□□□□ 0.98
TRIM35-203ENST00000521253 MMAAQ8IVH4 418 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms