RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 ARMCX3Q9UH62 379 aaPredicted RBP11.86□□□□□ -0.51
MRPS28-206ENST00000520946 NAALADL1Q9UQQ1 740 aa11.86□□□□□ -0.51
MRPS28-206ENST00000520946 ITPR1Q14643 2758 aa11.86□□□□□ -0.51
MRPS28-206ENST00000520946 ITIH6Q6UXX5 1313 aa11.86□□□□□ -0.51
MRPS28-206ENST00000520946 WDFY3Q8IZQ1 3526 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 TRIM38O00635 465 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 SLC16A3O15427 465 aaKnown RBP11.85□□□□□ -0.51
MRPS28-206ENST00000520946 SLC31A1O15431 190 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 PLRG1O43660 514 aaKnown RBP11.85□□□□□ -0.51
MRPS28-206ENST00000520946 RNGTTO60942 597 aaKnown RBP11.85□□□□□ -0.51
MRPS28-206ENST00000520946 SLC2A3P11169 496 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 BRD2P25440 801 aaKnown RBP11.85□□□□□ -0.51
MRPS28-206ENST00000520946 AKT2P31751 481 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 ACADSBP45954 432 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 FKBP3Q00688 224 aaKnown RBP11.85□□□□□ -0.51
MRPS28-206ENST00000520946 NNTQ13423 1086 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 PROX2Q3B8N5 592 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 ZC3H12AQ5D1E8 599 aaKnown RBP11.85□□□□□ -0.51
MRPS28-206ENST00000520946 KRBA2Q6ZNG9 492 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 TRIM69Q86WT6 500 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 ERICH1Q86X53 443 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 SMYD4Q8IYR2 804 aaPredicted RBP11.85□□□□□ -0.51
MRPS28-206ENST00000520946 RFFLQ8WZ73 363 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 TFAP2BQ92481 460 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 THSD1Q9NS62 852 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 PCDHB1Q9Y5F3 818 aa11.85□□□□□ -0.51
MRPS28-206ENST00000520946 GCN1Q92616 2671 aaKnown RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 MYLKQ15746 1914 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 SYNJ2BP-COX16A0A087WUM0 186 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 OPA1O60313 960 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 CSO75390 466 aaKnown RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 PCDH8O95206 1070 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 KRT5P13647 590 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 VAV1P15498 845 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 DGKAP23743 735 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 DRD3P35462 400 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 KCNMA1Q12791 1236 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 CNTN1Q12860 1018 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 ZNF177Q13360 481 aaPredicted RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 CCDC40Q4G0X9 1142 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 PKDCCQ504Y2 493 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 TTC39BQ5VTQ0 682 aaPredicted RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 TAC4Q86UU9 113 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 CCAR2Q8N163 923 aaKnown RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 OR4C6Q8NH72 309 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 MAPK15Q8TD08 544 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 KLK6Q92876 244 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 ERCC4Q92889 916 aaPredicted RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 MYEOVQ96EZ4 313 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 CCDC97Q96F63 343 aaPredicted RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 WBP1Q96G27 269 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 RPRD1AQ96P16 312 aaPredicted RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 MED15Q96RN5 788 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 DUSP23Q9BVJ7 150 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 MUC3BQ9H195 1237 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 FAM204AQ9H8W3 233 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 POLR1BQ9H9Y6 1135 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 METTL14Q9HCE5 456 aaKnown RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 CPNE5Q9HCH3 593 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 PREBQ9HCU5 417 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 KLHL11Q9NVR0 708 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 COX16Q9P0S2 106 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 IPO11Q9UI26 975 aaKnown RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 VPS28Q9UK41 221 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 HPSEQ9Y251 543 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 CA5BQ9Y2D0 317 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 COQ4Q9Y3A0 265 aa11.84□□□□□ -0.51
MRPS28-206ENST00000520946 TP53BP1Q12888 1972 aaPredicted RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 MUC22E2RYF6 1773 aaPredicted RBP11.84□□□□□ -0.51
MRPS28-206ENST00000520946 A0A1B0GVM2 712 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 TCAF2A6NFQ2 919 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 KPNA3O00505 521 aaPredicted RBP11.83□□□□□ -0.52
MRPS28-206ENST00000520946 MED7O43513 233 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 ZNF202O95125 648 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 CKMT1AP12532 417 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 PRLRP16471 622 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 RECQLP46063 649 aaPredicted RBP11.83□□□□□ -0.52
MRPS28-206ENST00000520946 LSSP48449 732 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 ERVPABLB-1P60509 514 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 CDK17Q00537 523 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 KCNC4Q03721 635 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 STIM1Q13586 685 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 DLG2Q15700 870 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 ZCWPW2Q504Y3 356 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 FOXR1Q6PIV2 292 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 CIR1Q86X95 450 aaPredicted RBP11.83□□□□□ -0.52
MRPS28-206ENST00000520946 SLC25A45Q8N413 288 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 SLC39A13Q96H72 371 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 DPH1Q9BZG8 443 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 POPDC2Q9HBU9 364 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 DNAJC28Q9NX36 388 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.83□□□□□ -0.52
MRPS28-206ENST00000520946 ARHGAP20Q9P2F6 1191 aa11.83□□□□□ -0.52
MRPS28-206ENST00000520946 XPO7Q9UIA9 1087 aaKnown RBP11.83□□□□□ -0.52
MRPS28-206ENST00000520946 A0A1W2PQU0 124 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 CPED1A4D0V7 1026 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 KCNU1A8MYU2 1149 aa11.82□□□□□ -0.52
MRPS28-206ENST00000520946 H3BM21 787 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms