RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 PCDHGA3Q9Y5H0 932 aa5.48□□□□□ -1.53
HDAC2-204ENST00000518756 NOX1Q9Y5S8 564 aa5.48□□□□□ -1.53
HDAC2-204ENST00000518756 UBR3Q6ZT12 1888 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 COL4A3Q01955 1670 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 PIPSLA2A3N6 862 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 EBAG9O00559 213 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 SGTAO43765 313 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 SLC37A4O43826 429 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 SRGAP2O75044 1071 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 N4BP1O75113 896 aaKnown RBP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 FAM200BP0CF97 657 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 CKBP12277 381 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 KRT13P13646 458 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 SLC6A2P23975 617 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 PSMC2P35998 433 aaKnown RBP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 USP8P40818 1118 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 STAT1P42224 750 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 MATR3P43243 847 aaKnown RBP eCLIP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 OCA2Q04671 838 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 ICA1Q05084 483 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 C2orf54Q08AI8 447 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 CUL1Q13616 776 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 NFIL3Q16649 462 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 UBE2SQ16763 222 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 KIAA0753Q2KHM9 967 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 QRICH1Q2TAL8 776 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 DNAJC21Q5F1R6 531 aaKnown RBP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 SYCP2LQ5T4T6 812 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 CFAP58Q5T655 872 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 ABHD17BQ5VST6 288 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 CDC42EP5Q6NZY7 148 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 SYCE2Q6PIF2 218 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 USP37Q86T82 979 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 PNMA8AQ86V59 439 aaPredicted RBP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 TMEM132CQ8N3T6 1108 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 FITM2Q8N6M3 262 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 NOA1Q8NC60 698 aaKnown RBP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 CHURC1Q8WUH1 139 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 DNAJC19Q96DA6 116 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 COQ10AQ96MF6 247 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 CCDC43Q96MW1 224 aaKnown RBP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 RUNDC3BQ96NL0 473 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 BBC3Q96PG8 261 aaPredicted RBP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 IWS1Q96ST2 819 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 ARPC5LQ9BPX5 153 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 SLC13A1Q9BZW2 595 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 C11orf54Q9H0W9 315 aaPredicted RBP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 TAOK3Q9H2K8 898 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 ZCCHC17Q9NP64 241 aaKnown RBP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 KCNMB3Q9NPA1 279 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 NLRC4Q9NPP4 1024 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 RNF181Q9P0P0 153 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 HDAC6Q9UBN7 1215 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 TRIM10Q9UDY6 481 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 HERC5Q9UII4 1024 aaKnown RBP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 RASAL2Q9UJF2 1139 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 MRPL11Q9Y3B7 192 aaKnown RBP5.47□□□□□ -1.53
HDAC2-204ENST00000518756 SPEF1Q9Y4P9 236 aa5.47□□□□□ -1.53
HDAC2-204ENST00000518756 BAZ2BQ9UIF8 2168 aaKnown RBP5.46□□□□□ -1.53
HDAC2-204ENST00000518756 FRMD3A2A2Y4 597 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 UNC119BA6NIH7 251 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 LRRIQ3A6PVS8 624 aaPredicted RBP5.46□□□□□ -1.54
HDAC2-204ENST00000518756 TMCO5BA8MYB1 307 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 E9PMD0 336 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 H0YIN7 160 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 GCOM1H8Y6P7 765 aaPredicted RBP5.46□□□□□ -1.54
HDAC2-204ENST00000518756 POLRMTO00411 1230 aaKnown RBP5.46□□□□□ -1.54
HDAC2-204ENST00000518756 KIAA0391O15091 583 aaKnown RBP5.46□□□□□ -1.54
HDAC2-204ENST00000518756 HTRA2O43464 458 aaPredicted RBP5.46□□□□□ -1.54
HDAC2-204ENST00000518756 TSPAN6O43657 245 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 ENTPD3O75355 529 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 PALMO75781 387 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 KIAA0754O94854 1291 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 SPDEFO95238 335 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 GCNT3O95395 438 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 ELANEP08246 267 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 CYP3A4P08684 503 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 H2AFZP0C0S5 128 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 POLR2MP0CAP2 368 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 EEF2P13639 858 aaKnown RBP5.46□□□□□ -1.54
HDAC2-204ENST00000518756 HSPA6P17066 643 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 CYP11B2P19099 503 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 FGFR4P22455 802 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 CIITAP33076 1130 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 ABCD1P33897 745 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 SHMT1P34896 483 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 KLK7P49862 253 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 STAT2P52630 851 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 SLC12A3P55017 1021 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 C21orf58P58505 322 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 SNRPFP62306 86 aaKnown RBP5.46□□□□□ -1.54
HDAC2-204ENST00000518756 GFPT1Q06210 699 aaPredicted RBP5.46□□□□□ -1.54
HDAC2-204ENST00000518756 TP53BP2Q13625 1128 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 LRRC41Q15345 812 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 PCBP2Q15366 365 aaKnown RBP eCLIP5.46□□□□□ -1.54
HDAC2-204ENST00000518756 NFE2Q16621 373 aaPredicted RBP5.46□□□□□ -1.54
HDAC2-204ENST00000518756 ZCWPW2Q504Y3 356 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 PRR16Q569H4 304 aa5.46□□□□□ -1.54
HDAC2-204ENST00000518756 B3GNTL1Q67FW5 361 aaPredicted RBP5.46□□□□□ -1.54
HDAC2-204ENST00000518756 H2AFVQ71UI9 128 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms