RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ARSAP15289 507 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 STIM1Q13586 685 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 BYSLQ13895 437 aaKnown RBP3.33□□□□□ -1.88
SKP1-203ENST00000517625 GALNT3Q14435 633 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 DLGAP5Q15398 846 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 C5orf22Q49AR2 442 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 CEP78Q5JTW2 689 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 FAM171A1Q5VUB5 890 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 JAKMIP3Q5VZ66 844 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 MTFR2Q6P444 385 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 SLC30A9Q6PML9 568 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 LVRNQ6Q4G3 990 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 FAM185AQ8N0U4 392 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 ARL14EPQ8N8R7 260 aaPredicted RBP3.33□□□□□ -1.88
SKP1-203ENST00000517625 TEX19Q8NA77 164 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 LINS1Q8NG48 757 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 ZCCHC10Q8TBK6 192 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 KCNJ9Q92806 393 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 TEFMQ96QE5 360 aaKnown RBP3.33□□□□□ -1.88
SKP1-203ENST00000517625 SIGLEC11Q96RL6 698 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 SH2D3AQ9BRG2 576 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 PIMREGQ9BSJ6 248 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 HERC2P3Q9BVR0 1158 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 STN1Q9H668 368 aaKnown RBP3.33□□□□□ -1.88
SKP1-203ENST00000517625 RMI1Q9H9A7 625 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 PDGFCQ9NRA1 345 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 ADARB2Q9NS39 739 aaKnown RBP3.33□□□□□ -1.88
SKP1-203ENST00000517625 PPP1R14DQ9NXH3 145 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 ARL15Q9NXU5 204 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 CNOT7Q9UIV1 285 aaKnown RBP3.33□□□□□ -1.88
SKP1-203ENST00000517625 OSGIN2Q9Y236 505 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 FRMD4BQ9Y2L6 1034 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 CRYL1Q9Y2S2 319 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 ZNF804BA4D1E1 1349 aa3.33□□□□□ -1.88
SKP1-203ENST00000517625 GAGE10A6NGK3 116 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 SH2D7A6NKC9 451 aaPredicted RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 PEX12O00623 359 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 TLX3O43711 291 aaPredicted RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 STRNO43815 780 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 TLR2O60603 784 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 NFATC1O95644 943 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 CPA1P15085 419 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 KELP23276 732 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 PRKCHP24723 683 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 TYK2P29597 1187 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 AVPR2P30518 371 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 CPA2P48052 419 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 CYP2J2P51589 502 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 C21orf58P58505 322 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 SSBP2P81877 361 aaPredicted RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 ARHGAP8P85298 464 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 PGM5Q15124 567 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 TRIP6Q15654 476 aaKnown RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 BAK1Q16611 211 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 LRRC24Q50LG9 513 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 ALG10Q5BKT4 473 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 ALG10BQ5I7T1 473 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 NCAPH2Q6IBW4 605 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 ZNF793Q6ZN11 406 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 YTHDF3Q7Z739 585 aaKnown RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 ANKRD13BQ86YJ7 626 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 DDIASQ8IXT1 998 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 ESX1Q8N693 406 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 PAF1Q8N7H5 531 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 ZNF366Q8N895 744 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 SLC44A5Q8NCS7 719 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 LSM14AQ8ND56 463 aaKnown RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 TNIP2Q8NFZ5 429 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 RFWD2Q8NHY2 731 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 FAM110DQ8TAY7 271 aaPredicted RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 WIPF2Q8TF74 440 aaPredicted RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 HDAC7Q8WUI4 952 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 HTRA1Q92743 480 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 COQ8BQ96D53 544 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 WDR83Q9BRX9 315 aaKnown RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 TMEM79Q9BSE2 394 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 IFT27Q9BW83 186 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 HDHD5Q9BXW7 423 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.32□□□□□ -1.883e-12■■■■□ 26.6
SKP1-203ENST00000517625 TASP1Q9H6P5 420 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 TTC12Q9H892 705 aaPredicted RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 ACTR5Q9H9F9 607 aaPredicted RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 Q9N2J8 555 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 MLXIPLQ9NP71 852 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 UBN1Q9NPG3 1134 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.32□□□□□ -1.88
SKP1-203ENST00000517625 TMEM45AQ9NWC5 275 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 BEX4Q9NWD9 120 aaPredicted RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 ALKBH4Q9NXW9 302 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 TUBA8Q9NY65 449 aaPredicted RBP3.32□□□□□ -1.88
SKP1-203ENST00000517625 HCN3Q9P1Z3 774 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 KLHL13Q9P2N7 655 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 UPB1Q9UBR1 384 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 DHDHQ9UQ10 334 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 CLDN16Q9Y5I7 305 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 ZMYM2Q9UBW7 1377 aa3.32□□□□□ -1.88
SKP1-203ENST00000517625 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.31□□□□□ -1.88
SKP1-203ENST00000517625 OR6C68A6NDL8 312 aa3.31□□□□□ -1.88
SKP1-203ENST00000517625 GAGE12JA6NER3 117 aa3.31□□□□□ -1.88
SKP1-203ENST00000517625 FAM90A7PA6NKC0 464 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms