RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 A0A0U1RQJ8 604 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 DYTNA2CJ06 578 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 RASA4BC9J798 803 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 ZNF587BE7ETH6 402 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 TCERG1O14776 1098 aaKnown RBP0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 PHGDHO43175 533 aaKnown RBP0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 BCL2L11O43521 198 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 PCDH7O60245 1069 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 NDUFS2O75306 463 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 RASAL1O95294 804 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 MOCS3O95396 460 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 RFPL3SP0C7P2 107 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 CD53P19397 219 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 SLC11A2P49281 568 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 AGTR2P50052 363 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 ITGA8P53708 1063 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 GRAPQ13588 217 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 DNASE1L3Q13609 305 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 CTTNQ14247 550 aaKnown RBP0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 EFHC1Q5JVL4 640 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 ZNF613Q6PF04 617 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 SLC15A4Q8N697 577 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 CMASQ8NFW8 434 aaPredicted RBP0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 TRIM58Q8NG06 486 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 FIG4Q92562 907 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 VPS50Q96JG6 964 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 PPP1R13BQ96KQ4 1090 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 TRIM51Q9BSJ1 452 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 TARS2Q9BW92 718 aaKnown RBP0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 RAB11FIP5Q9BXF6 653 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 SLC25A18Q9H1K4 315 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 TMX1Q9H3N1 280 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 ZNF304Q9HCX3 659 aa0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 ZNF277Q9NRM2 450 aaPredicted RBP0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 MTPAPQ9NVV4 582 aaKnown RBP eCLIP0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 ZNF282Q9UDV7 671 aaPredicted RBP0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP0.05□□□□□ -2.4
RNU6-557P-201ENST00000516842 A0A087WWL8 130 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 A0A0G2JPF8 293 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 UNCXA6NJT0 531 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 A6NNZ2 444 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 TMEM233B4DJY2 109 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 HNRNPCL3B7ZW38 293 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 FAM227AF5H4B4 570 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 RGS10O43665 173 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 MARCH6O60337 910 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 HNRNPCL1O60812 293 aaKnown RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 CLDN14O95500 239 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 ASMTLO95671 621 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 PARP1P09874 1014 aaKnown RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 PRSS56P0CW18 603 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 HNRNPCL4P0DMR1 293 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 PDIA4P13667 645 aaKnown RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 MGMTP16455 207 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 ERCC5P28715 1186 aaPredicted RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 AVPR1AP37288 418 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 PTGER3P43115 390 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 FMO5P49326 533 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 PGDP52209 483 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 EIF4A1P60842 406 aaKnown RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 TNFAIP2Q03169 654 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 ALG10Q5BKT4 473 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 ALG10BQ5I7T1 473 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 CACHD1Q5VU97 1274 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 CLEC9AQ6UXN8 241 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 GPRIN3Q6ZVF9 776 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 HEATR3Q7Z4Q2 680 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 SFR1Q86XK3 245 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 FAM47BQ8NA70 645 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 NFAM1Q8NET5 270 aaPredicted RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 OR2T6Q8NHC8 308 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 LNX1Q8TBB1 728 aaPredicted RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 LEO1Q8WVC0 666 aaPredicted RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 IP6K1Q92551 441 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 ZNF845Q96IR2 970 aaPredicted RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 CNOT6LQ96LI5 555 aaKnown RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 GPR78Q96P69 363 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 CSF3RQ99062 836 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 SDHCQ99643 169 aaPredicted RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 PIGQQ9BRB3 760 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 SELENOOQ9BVL4 669 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 TRIM5Q9C035 493 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 KLHL31Q9H511 634 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 TRIM36Q9NQ86 728 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 BARHL2Q9NY43 387 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 ZDHHC2Q9UIJ5 367 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 FAF1Q9UNN5 650 aaPredicted RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 ASTN2O75129 1339 aaPredicted RBP0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 TNKSO95271 1327 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 CGNL1Q0VF96 1302 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 SPATA31A5Q5VU36 1347 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 SPATA31A7Q8IWB4 1347 aa0.04□□□□□ -2.4
RNU6-557P-201ENST00000516842 HMX3A6NHT5 357 aa0.03□□□□□ -2.4
RNU6-557P-201ENST00000516842 SAC3D1A6NKF1 404 aa0.03□□□□□ -2.4
RNU6-557P-201ENST00000516842 SMIM1B2RUZ4 78 aa0.03□□□□□ -2.4
RNU6-557P-201ENST00000516842 SRRM5B3KS81 715 aa0.03□□□□□ -2.4
RNU6-557P-201ENST00000516842 PSMD14O00487 310 aa0.03□□□□□ -2.4
RNU6-557P-201ENST00000516842 CD3EAPO15446 510 aaKnown RBP0.03□□□□□ -2.4
RNU6-557P-201ENST00000516842 ZSCAN9O15535 394 aaPredicted RBP0.03□□□□□ -2.4
RNU6-557P-201ENST00000516842 DHX16O60231 1041 aaKnown RBP0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms