RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 PRCCQ92733 491 aaPredicted RBP11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 PTPRN2Q92932 1015 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 TBC1D31Q96DN5 1066 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 ARHGEF26Q96DR7 871 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 SIPA1Q96FS4 1042 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 LOXL4Q96JB6 756 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 FAM129BQ96TA1 746 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 PSMB7Q99436 277 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 EIF3CQ99613 913 aaKnown RBP11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 C2orf49Q9BVC5 232 aaPredicted RBP11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 NUP85Q9BW27 656 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 MUC3BQ9H195 1237 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 SLC6A17Q9H1V8 727 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 MTG2Q9H4K7 406 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 FBRSQ9HAH7 460 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 NDFIP2Q9NV92 336 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 IP6K2Q9UHH9 426 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 VPS28Q9UK41 221 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 USP18Q9UMW8 372 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 NEU3Q9UQ49 428 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 SDK1Q7Z5N4 2213 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 EP300Q09472 2414 aaPredicted RBP11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 CXorf51AA0A1B0GTR3 108 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 WASH4PA8MWX3 477 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 MAP3K13O43283 966 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 ATP9BO43861 1147 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 CREB3O43889 395 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 PRPSAP2O60256 369 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 RHOBTB1O94844 696 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 MT-CO1P00395 513 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 TMEM253P0C7T8 217 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 EPHB2P29323 1055 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 HTR7P34969 479 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 HCAR3P49019 387 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 MAPKAPK2P49137 400 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 NUMBP49757 651 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 STK19P49842 368 aaPredicted RBP11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 GNA12Q03113 381 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 ZBTB16Q05516 673 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 SLC20A2Q08357 652 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 SPDYCQ5MJ68 293 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 ABCA7Q8IZY2 2146 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 DCLK2Q8N568 766 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 CTNNBL1Q8WYA6 563 aaPredicted RBP11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 BTBD6Q96KE9 485 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 PANX2Q96RD6 677 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 PEBP4Q96S96 227 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 PACSIN1Q9BY11 444 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 ACE2Q9BYF1 805 aaPredicted RBP11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 RSPH9Q9H1X1 276 aaPredicted RBP11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 MAGEH1Q9H213 219 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 SPTLC3Q9NUV7 552 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 USP36Q9P275 1121 aaKnown RBP11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 UVRAGQ9P2Y5 699 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 DNAI1Q9UI46 699 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 MBD1Q9UIS9 605 aaPredicted RBP11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 ANAPC7Q9UJX3 599 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 AP4E1Q9UPM8 1137 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 HS3ST2Q9Y278 367 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 USP34Q70CQ2 3546 aa11.43□□□□□ -0.58
SCARNA20-201ENST00000516768 DMDP11532 3685 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 IGHV1OR15-9A0A0B4J2B8 117 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 EDDM13A0A1B0GTR0 161 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 SNAP91O60641 907 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 SIN3BO75182 1162 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 ZMPSTE24O75844 475 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 IGLV3-19P01714 112 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 ACADMP11310 421 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 BCKDHBP21953 392 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 TGM1P22735 817 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 IL1R2P27930 398 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 ETFBP38117 255 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 TPMTP51580 245 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 DLG2Q15700 870 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 ELF2Q15723 593 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 CA9Q16790 459 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 ACCSLQ4AC99 568 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 KIAA1324Q6UXG2 1013 aaKnown RBP11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 SLC36A4Q6YBV0 504 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 CCDC170Q8IYT3 715 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 UMODL1-AS1Q8N2C9 162 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 SH2D3CQ8N5H7 860 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 RTL3Q8N8U3 475 aaKnown RBP11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 DCAF4L2Q8NA75 395 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 OR7D4Q8NG98 312 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 SLC35G2Q8TBE7 412 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 ARHGEF2Q92974 986 aaKnown RBP11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 SPACA7Q96KW9 195 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 EPAS1Q99814 870 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 SPON2Q9BUD6 331 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 SNRNP25Q9BV90 132 aaKnown RBP11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 DHX35Q9H5Z1 703 aaKnown RBP11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 CATSPERBQ9H7T0 1116 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 GPATCH2LQ9NWQ4 482 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 DONSONQ9NYP3 566 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 WSB2Q9NYS7 404 aaPredicted RBP11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 CTTNBP2NLQ9P2B4 639 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 NCDNQ9UBB6 729 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 LCMT1Q9UIC8 334 aa11.42□□□□□ -0.58
SCARNA20-201ENST00000516768 VPS51Q9UID3 782 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms