RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 FUZQ9BT04 418 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SPXQ9BT56 116 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 FSD1Q9BTV5 496 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 MYL10Q9BUA6 226 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 HTATIP2Q9BUP3 242 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 MXD3Q9BW11 206 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 ACAT2Q9BWD1 397 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SF3B5Q9BWJ5 86 aaKnown RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TEX12Q9BXU0 123 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 MAK16Q9BXY0 300 aaKnown RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 PACSIN1Q9BY11 444 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRIM54Q9BYV2 358 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TPSD1Q9BZJ3 242 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRIM6Q9C030 488 aaPredicted RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 PITHD1Q9GZP4 211 aaPredicted RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 DNAI2Q9GZS0 605 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 BRD8Q9H0E9 1235 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 NT5C3AQ9H0P0 336 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 C1orf21Q9H246 121 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 VPS16Q9H269 839 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 CHST8Q9H2A9 424 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TAOK3Q9H2K8 898 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TNMDQ9H2S6 317 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 MRPL46Q9H2W6 279 aaKnown RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TP63Q9H3D4 680 aaPredicted RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 NDST4Q9H3R1 872 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 MUC13Q9H3R2 512 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 ABHD16BQ9H3Z7 469 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 POFUT1Q9H488 388 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM83DQ9H4H8 585 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 ACAD9Q9H845 621 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 CHODLQ9H9P2 273 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 COPS7BQ9H9Q2 264 aaPredicted RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 C17orf75Q9HAS0 396 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SMURF2Q9HAU4 748 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 VEZTQ9HBM0 779 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZBTB26Q9HCK0 441 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 PDE7BQ9NP56 450 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 MID1IP1Q9NPA3 183 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 HEYLQ9NQ87 328 aaPredicted RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 XPNPEP3Q9NQH7 507 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 G6PC2Q9NQR9 355 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 PRDM8Q9NQV8 689 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 ARHGEF3Q9NR81 526 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SNX15Q9NRS6 342 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 KLC4Q9NSK0 619 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SIRT3Q9NTG7 399 aaPredicted RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SACM1LQ9NTJ5 587 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 GJB4Q9NTQ9 266 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 GIMAP4Q9NUV9 329 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TDP1Q9NUW8 608 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SEPT11Q9NVA2 429 aaKnown RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TMLHEQ9NVH6 421 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 RLIMQ9NVW2 624 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLTMQ9NWH9 1034 aaKnown RBP eCLIP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 HPF1Q9NWY4 346 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 DCAF16Q9NXF7 216 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRMT1Q9NXH9 659 aaKnown RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 KCTD5Q9NXV2 234 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 STK32BQ9NY57 414 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TAB2Q9NYJ8 693 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 GPRC5DQ9NZD1 345 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 RGL1Q9NZL6 768 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 EHD2Q9NZN4 543 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 CWC15Q9P013 229 aaKnown RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 MRPL15Q9P015 296 aaKnown RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 HCN3Q9P1Z3 774 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 CFAP97Q9P2B7 532 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 MARCH4Q9P2E8 410 aaPredicted RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 IGSF9Q9P2J2 1179 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 RNF7Q9UBF6 113 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 DNAJB11Q9UBS4 358 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 WNT16Q9UBV4 365 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF70Q9UC06 446 aaPredicted RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF212Q9UDV6 495 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 ADD3Q9UEY8 706 aaKnown RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 CHORDC1Q9UHD1 332 aaPredicted RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TBK1Q9UHD2 729 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 IPO11Q9UI26 975 aaKnown RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 CPA4Q9UI42 421 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SCOCQ9UIL1 159 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 HOOK1Q9UJC3 728 aaKnown RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SH3BGRL2Q9UJC5 107 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 TUBE1Q9UJT0 475 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 LEF1Q9UJU2 399 aaPredicted RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 ANAPC5Q9UJX4 755 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 BAG5Q9UL15 447 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZDHHC8Q9ULC8 765 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZMYND8Q9ULU4 1186 aaPredicted RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 CAPN11Q9UMQ6 739 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 NFU1Q9UMS0 254 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SUFUQ9UMX1 484 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 PCDHGB4Q9UN71 923 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 PCDHA6Q9UN73 950 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 RABL2BQ9UNT1 228 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 COG5Q9UP83 839 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SCAF8Q9UPN6 1271 aaKnown RBP0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 NAALADL1Q9UQQ1 740 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 SH2B3Q9UQQ2 575 aa0.62□□□□□ -2.31
RNU4-54P-201ENST00000516428 LIPT1Q9Y234 373 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms