RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 CDH18Q13634 790 aa13.52□□□□□ -0.25
TCOF1-214ENST00000515035 QPRTQ15274 297 aa13.52□□□□□ -0.25
TCOF1-214ENST00000515035 POLNQ7Z5Q5 900 aa13.52□□□□□ -0.25
TCOF1-214ENST00000515035 FAM83AQ86UY5 434 aa13.52□□□□□ -0.25
TCOF1-214ENST00000515035 MIB1Q86YT6 1006 aa13.52□□□□□ -0.25
TCOF1-214ENST00000515035 KBTBD8Q8NFY9 601 aa13.52□□□□□ -0.25
TCOF1-214ENST00000515035 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.25
TCOF1-214ENST00000515035 SLCO1B3Q9NPD5 702 aa13.52□□□□□ -0.25
TCOF1-214ENST00000515035 TBC1D13Q9NVG8 400 aa13.52□□□□□ -0.25
TCOF1-214ENST00000515035 NUDT17P0C025 328 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 ZSCAN5DPP0CG00 497 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 IL1R1P14778 569 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 TRAP1Q12931 704 aaKnown RBP13.51□□□□□ -0.25
TCOF1-214ENST00000515035 SPIDRQ14159 915 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 ZNF846Q147U1 533 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 PARP6Q2NL67 630 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 RNF19BQ6ZMZ0 732 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 ULK2Q8IYT8 1036 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 TMEM132CQ8N3T6 1108 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 OR56A4Q8NGH8 313 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 TMEM176AQ96HP8 235 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 OSBPL11Q9BXB4 747 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 ABI2Q9NYB9 513 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-214ENST00000515035 INVSQ9Y283 1065 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 BTN3A3O00478 584 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 S100A1P23297 94 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 STAT5AP42229 794 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 NAMPTP43490 491 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 HIPK1Q86Z02 1210 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 CDK20Q8IZL9 346 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 HPS1Q92902 700 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 TAAR1Q96RJ0 339 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 APBA2Q99767 749 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 TINF2Q9BSI4 451 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 NUDT5Q9UKK9 219 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 DYRK1BQ9Y463 629 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 LRRC10BA6NIK2 292 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 H7C0S8 307 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 GAS2O43903 313 aaKnown RBP13.51□□□□□ -0.25
TCOF1-214ENST00000515035 NOS3P29474 1203 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 SLC11A2P49281 568 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 NAGLUP54802 743 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 NAB1Q13506 487 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 AKIRIN2Q53H80 203 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 CWF19L1Q69YN2 538 aaKnown RBP13.51□□□□□ -0.25
TCOF1-214ENST00000515035 AAGABQ6PD74 315 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 PTCD3Q96EY7 689 aaKnown RBP13.51□□□□□ -0.25
TCOF1-214ENST00000515035 PRKD2Q9BZL6 878 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 CLK4Q9HAZ1 481 aaKnown RBP13.51□□□□□ -0.25
TCOF1-214ENST00000515035 C3orf18Q9UK00 162 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 GMEB1Q9Y692 573 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 WFS1O76024 890 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 ASS1P00966 412 aaKnown RBP13.51□□□□□ -0.25
TCOF1-214ENST00000515035 CYP1A1P04798 512 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-214ENST00000515035 ALOX5P09917 674 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 CCR1P32246 355 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 ST3GAL1Q11201 340 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 CCNIQ14094 377 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 ZNF671Q8TAW3 534 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 TMCO1Q9UM00 188 aa13.51□□□□□ -0.25
TCOF1-214ENST00000515035 ARL4DP49703 201 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 PUDPQ08623 228 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 DPYSL3Q14195 570 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 RNF220Q5VTB9 566 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 AHI1Q8N157 1196 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 FBXL16Q8N461 479 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 EFCAB3Q8N7B9 438 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 BHMTQ93088 406 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 L3MBTL3Q96JM7 780 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-214ENST00000515035 PLA2G4CQ9UP65 541 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 SLIT1O75093 1534 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 F5H5T6 163 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 TRIM38O00635 465 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 PRRG1O14668 218 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 TPP1O14773 563 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 TNK2Q07912 1038 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 NFIAQ12857 509 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 MPZL3Q6UWV2 235 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 LRRC49Q8IUZ0 686 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 ASB2Q96Q27 587 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 RPS6KB2Q9UBS0 482 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 C2CD2LO14523 706 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 TMCC2O75069 709 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 AKAP5P24588 427 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 SREBF1P36956 1147 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 AADACL2Q6P093 401 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 SPESP1Q6UW49 350 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 YAF2Q8IY57 180 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 BAP1Q92560 729 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 KLK14Q9P0G3 267 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 APOC4-APOC2K7ER74 178 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 APOC2P02655 101 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 UQCRBP14927 111 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 ZNF37AP17032 561 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-214ENST00000515035 NUMBP49757 651 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 OXCT1P55809 520 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 XIAPP98170 497 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 AMIGO2Q86SJ2 522 aa13.5□□□□□ -0.25
TCOF1-214ENST00000515035 WDR49Q8IV35 697 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms