RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ALFQ53S48 1182 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 CCDC183Q5T5S1 534 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 KIAA0895LQ68EN5 471 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 APTXQ7Z2E3 356 aaKnown RBP10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 NAXDQ8IW45 347 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 AADATQ8N5Z0 425 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 C1orf74Q96LT6 269 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 CFAP57Q96MR6 1250 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 SPAG5Q96R06 1193 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 PPP1R9BQ96SB3 815 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 PSMB7Q99436 277 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 SIK2Q9H0K1 926 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 HSD3B7Q9H2F3 369 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 GAREM1Q9H706 876 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 IL21RQ9HBE5 538 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 NLRC4Q9NPP4 1024 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 METTL5Q9NRN9 209 aaKnown RBP10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 TMPRSS4Q9NRS4 437 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 SLC25A13Q9UJS0 675 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 VPS28Q9UK41 221 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 FNDC3AQ9Y2H6 1198 aaKnown RBP10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 SNX10Q9Y5X0 201 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 CHD8Q9HCK8 2581 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 SPAARA0A1B0GVQ0 90 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 A0A1B0GVT2 93 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 LRRC10BA6NIK2 292 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 LRRC72A6NJI9 287 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 E9PAM4 449 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 ALOX15BO15296 676 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 SH3BP5O60239 455 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 ENDOD1O94919 500 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 IL1BP01584 269 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 UNGP13051 313 aaPredicted RBP10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 GOT1P17174 413 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 C5AR1P21730 350 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 DRD3P35462 400 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 NNMTP40261 264 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 STAT1P42224 750 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 CSNK1EP49674 416 aaKnown RBP10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 METAP1P53582 386 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 GALCP54803 685 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 ADPRHP54922 357 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 GSCP56915 257 aaPredicted RBP10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 FAM193AP78312 1265 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 SIM1P81133 766 aaPredicted RBP10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 TEAD4Q15561 434 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 HLA-BQ31612 363 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 NCEH1Q6PIU2 408 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 TRIM72Q6ZMU5 477 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 SETD3Q86TU7 594 aaPredicted RBP10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 SH2D3CQ8N5H7 860 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 EMC1Q8N766 993 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 ANKRD20A12PQ8NF67 263 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 OR2T34Q8NGX1 318 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 GANCQ8TET4 914 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 CAMK1GQ96NX5 476 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 ERGIC2Q96RQ1 377 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 HAPLN3Q96S86 360 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 OMDQ99983 421 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 MUC3BQ9H195 1237 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 NEUROG2Q9H2A3 272 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 ZNF212Q9UDV6 495 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 HS3ST2Q9Y278 367 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 PCDHGB2Q9Y5G2 931 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 AKAP13Q12802 2813 aa10.74□□□□□ -0.69
HMGXB3-205ENST00000514469 EPG5Q9HCE0 2579 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 A0A1W2PPC4 97 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 CBFA2T3O75081 653 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 TOP3BO95985 862 aaKnown RBP10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 RHOCP08134 193 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 SRCP12931 536 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 PTPN9P43378 593 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 CCR5P51681 352 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 RACK1P63244 317 aaKnown RBP10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 KRT83P78385 493 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 TYRO3Q06418 890 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 PTP4A2Q12974 167 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 DLG2Q15700 870 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 ST3GAL2Q16842 350 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 CLEC16AQ2KHT3 1053 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 KIF19Q2TAC6 998 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 C6orf118Q5T5N4 469 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 LAYNQ6UX15 382 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 LRRC31Q6UY01 552 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 DBX2Q6ZNG2 339 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 Q6ZVU0 165 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 TFAP2DQ7Z6R9 452 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 DSG4Q86SJ6 1040 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 FAM131BQ86XD5 332 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 DCAF4L2Q8NA75 395 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 NEK11Q8NG66 645 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 SLC30A5Q8TAD4 765 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 BAHD1Q8TBE0 780 aaPredicted RBP10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 OR8D1Q8WZ84 308 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 PCDHB18PQ96TA0 734 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 C11orf70Q9BRQ4 267 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 C2orf49Q9BVC5 232 aaPredicted RBP10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 TMEM121BQ9BXQ6 578 aaPredicted RBP10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 EBF2Q9HAK2 575 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 TM7SF3Q9NS93 570 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms