RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 LCLAT1Q6UWP7 414 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 TRIM69Q86WT6 500 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 FRS2Q8WU20 508 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 FAM131CQ96AQ9 280 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 SPAG5Q96R06 1193 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 ASCL3Q9NQ33 180 aa20.96■□□□□ 0.95
SQSTM1-215ENST00000514093 DXOO77932 396 aaKnown RBP20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 RHOBTB3O94955 611 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 PFKFB1P16118 471 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 PDGFRAP16234 1089 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 MCCD1P59942 119 aaPredicted RBP20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 ERVPABLB-1P60509 514 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 KCNMA1Q12791 1236 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 ACCSLQ4AC99 568 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 SETMARQ53H47 684 aaPredicted RBP20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 AGBL4Q5VU57 503 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 TCERG1LQ5VWI1 586 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 CIR1Q86X95 450 aaPredicted RBP20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 SLC39A13Q96H72 371 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 APOLD1Q96LR9 279 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 SERPINB11Q96P15 392 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 ZSWIM1Q9BR11 485 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 ABCG4Q9H172 646 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 FZD3Q9NPG1 666 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 TLR6Q9Y2C9 796 aa20.95■□□□□ 0.94
SQSTM1-215ENST00000514093 TDRD6O60522 2096 aaKnown RBP20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 SLC7A4O43246 635 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 STX10O60499 249 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 RNGTTO60942 597 aaKnown RBP20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 WISP1O95388 367 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 TACR2P21452 398 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 NUDT1P36639 197 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 NUCB2P80303 420 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 ZCWPW2Q504Y3 356 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 ZNF542PQ5EBM4 170 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 DCAF17Q5H9S7 520 aaPredicted RBP20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 C3orf38Q5JPI3 329 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 CHSY1Q86X52 802 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 GUF1Q8N442 669 aaKnown RBP20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 UBR7Q8N806 425 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 OR8D1Q8WZ84 308 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 CALN1Q9BXU9 219 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 DPH1Q9BZG8 443 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 KLHL11Q9NVR0 708 aa20.94■□□□□ 0.94
SQSTM1-215ENST00000514093 M0QYV0 167 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 BNIP3LO60238 219 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 PIAS2O75928 621 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 TAS2R38P59533 333 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 YWHAEP62258 255 aaKnown RBP20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 DNM1Q05193 864 aaKnown RBP20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 ZC3H12AQ5D1E8 599 aaKnown RBP20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 FAM46CQ5VWP2 391 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 SYPL2Q5VXT5 272 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 TMEM270Q6UE05 265 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 TAC4Q86UU9 113 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 TMEM145Q8NBT3 493 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 CCDC47Q96A33 483 aaKnown RBP20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 MED8Q96G25 268 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 NOX5Q96PH1 765 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 THSD1Q9NS62 852 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 TJP2Q9UDY2 1190 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 RCOR1Q9UKL0 485 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 KIAA1257Q9ULG3 409 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 SATB2Q9UPW6 733 aa20.93■□□□□ 0.94
SQSTM1-215ENST00000514093 LY6G6EA0A0G2JKS1 128 aa20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 A0A1W2PNU3 283 aaPredicted RBP20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 K7ELQ4 463 aaPredicted RBP20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 RNF225M0QZC1 329 aaPredicted RBP20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 NEBLO76041 1014 aa20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 F13A1P00488 732 aa20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 MYL1P05976 194 aa20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 CENPBP07199 599 aaPredicted RBP20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 ZSCAN22P10073 491 aaPredicted RBP20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 EPB41P11171 864 aaKnown RBP20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 ZNF18P17022 549 aa20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 BRD2P25440 801 aaKnown RBP20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 DSG4Q86SJ6 1040 aa20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 SMYD4Q8IYR2 804 aaPredicted RBP20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 OR13H1Q8NG92 308 aa20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 MAPK15Q8TD08 544 aa20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 SNRNP27Q8WVK2 155 aaKnown RBP20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 FAM149B1Q96BN6 582 aa20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 PPM1HQ9ULR3 514 aa20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 U3KQA8 63 aa20.92■□□□□ 0.94
SQSTM1-215ENST00000514093 A0A1W2PQU0 124 aa20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 CLDN2P57739 230 aa20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 DPYDQ12882 1025 aa20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 CNGA2Q16280 664 aa20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 Q6ZVU0 165 aa20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 PRICKLE2Q7Z3G6 844 aa20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 CCAR2Q8N163 923 aaKnown RBP20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 IFI44Q8TCB0 444 aa20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 USP25Q9UHP3 1055 aa20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 COQ4Q9Y3A0 265 aa20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 PCDHB4Q9Y5E5 795 aa20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 PIEZO2Q9H5I5 2752 aa20.91■□□□□ 0.94
SQSTM1-215ENST00000514093 PMS2P1A4D2B8 440 aa20.9■□□□□ 0.94
SQSTM1-215ENST00000514093 C1QTNF3-AMACRE9PGA6 284 aa20.9■□□□□ 0.94
SQSTM1-215ENST00000514093 CETN3O15182 167 aa20.9■□□□□ 0.94
SQSTM1-215ENST00000514093 FBXO21O94952 628 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 254.1 ms