RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 QPCTQ16769 361 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 TMEM196Q5HYL7 178 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 C6orf118Q5T5N4 469 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 MEI1Q5TIA1 1274 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 CXorf57Q6NSI4 855 aaKnown RBP7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 ZNF852Q6ZMS4 543 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 ZNF783Q6ZMS7 281 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 ANKS1BQ7Z6G8 1248 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 TFAP2DQ7Z6R9 452 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 AHI1Q8N157 1196 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 SIX5Q8N196 739 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 PHTF2Q8N3S3 785 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 RTL3Q8N8U3 475 aaKnown RBP7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 WFDC5Q8TCV5 224 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 FAM3CQ92520 227 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 RAPGEF5Q92565 580 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 EDAQ92838 391 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 HES6Q96HZ4 224 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 CSPG4P5Q96PW8 444 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 PNKPQ96T60 521 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 USB1Q9BQ65 265 aaKnown RBP7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 PRDM16Q9HAZ2 1276 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 ARHGEF4Q9NR80 690 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 KIAA1522Q9P206 1035 aaPredicted RBP7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 GGA2Q9UJY4 613 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 CLEC4EQ9ULY5 219 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 PACSIN2Q9UNF0 486 aaPredicted RBP7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 TBC1D30Q9Y2I9 924 aa7.79□□□□□ -1.16
HMGXB3-204ENST00000513318 LRRK1Q38SD2 2015 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 MUC3AQ02505 3323 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 KANSL1LA0AUZ9 987 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 ILVBLA1L0T0 632 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 SHISA7A6NL88 538 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 C3orf70A6NLC5 250 aaPredicted RBP7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 PI4K2BG5E9Z4 385 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 DCLK1O15075 740 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 DDX3YO15523 660 aaKnown RBP7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 RAMP2O60895 175 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 KAT7O95251 611 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 S1PR4O95977 384 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 RHOCP08134 193 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 CISD3P0C7P0 127 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 AMPD1P23109 780 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 IL4RP24394 825 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 CSKP41240 450 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 GRIA2P42262 883 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 CDKN2BP42772 138 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 SLC6A11P48066 632 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 PEX5P50542 639 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 GALK1P51570 392 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 PLK1P53350 603 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 YBEYP58557 167 aaPredicted RBP7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 GRSF1Q12849 480 aaKnown RBP eCLIP7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 LMAN2Q12907 356 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 E2F5Q15329 346 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 RPS6KA1Q15418 735 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 TAZQ16635 292 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 GEN1Q17RS7 908 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 PLEKHG6Q3KR16 790 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 FBXO43Q4G163 708 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 ANKRD20A8PQ5CZ79 823 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 TFDP3Q5H9I0 405 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 FSCBQ5H9T9 825 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 ZNF569Q5MCW4 686 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 TMCO3Q6UWJ1 677 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 MFSD7Q6UXD7 560 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 TRIM67Q6ZTA4 783 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 KIAA0907Q7Z7F0 614 aaPredicted RBP7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 CCDC50Q8IVM0 306 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 RCOR2Q8IZ40 523 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 UMODL1-AS1Q8N2C9 162 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 SLC35F6Q8N357 371 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 LZTR1Q8N653 840 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 DCAF4L2Q8NA75 395 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 PCDH19Q8TAB3 1148 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 CCDC26Q8TAB7 109 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 ALG3Q92685 438 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 LMLNQ96KR4 655 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 RNF157Q96PX1 679 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 NELL2Q99435 816 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 MUC3BQ9H195 1237 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 MAGEH1Q9H213 219 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 CARD9Q9H257 536 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 TBC1D17Q9HA65 648 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 LTB4R2Q9NPC1 389 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 ABCB8Q9NUT2 735 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 NDFIP2Q9NV92 336 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 DNAI1Q9UI46 699 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 EFR3BQ9Y2G0 817 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 JRKLQ9Y4A0 524 aa7.78□□□□□ -1.16
HMGXB3-204ENST00000513318 DOCK9Q9BZ29 2069 aa7.77□□□□□ -1.17
HMGXB3-204ENST00000513318 TP53BP1Q12888 1972 aaPredicted RBP7.77□□□□□ -1.17
HMGXB3-204ENST00000513318 hCG_1818297A0A087WSY0 165 aa7.77□□□□□ -1.17
HMGXB3-204ENST00000513318 A0A0A0MRY4 1105 aa7.77□□□□□ -1.17
HMGXB3-204ENST00000513318 CXorf51AA0A1B0GTR3 108 aa7.77□□□□□ -1.17
HMGXB3-204ENST00000513318 TBC1D3BA6NDS4 549 aa7.77□□□□□ -1.17
HMGXB3-204ENST00000513318 APOL1O14791 398 aa7.77□□□□□ -1.17
HMGXB3-204ENST00000513318 TRIM24O15164 1050 aa7.77□□□□□ -1.17
HMGXB3-204ENST00000513318 NCAM2O15394 837 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms