RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 TMC2Q8TDI7 906 aa11.56□□□□□ -0.56
RNF4-218ENST00000513284 TAS1R2Q8TE23 839 aa11.56□□□□□ -0.56
RNF4-218ENST00000513284 TMEM174Q8WUU8 243 aa11.56□□□□□ -0.56
RNF4-218ENST00000513284 AZIN2Q96A70 460 aa11.56□□□□□ -0.56
RNF4-218ENST00000513284 IRX2Q9BZI1 471 aaPredicted RBP11.56□□□□□ -0.56
RNF4-218ENST00000513284 OLA1Q9NTK5 396 aaKnown RBP11.56□□□□□ -0.56
RNF4-218ENST00000513284 KLF15Q9UIH9 416 aa11.56□□□□□ -0.56
RNF4-218ENST00000513284 PPM1HQ9ULR3 514 aa11.56□□□□□ -0.56
RNF4-218ENST00000513284 MTMR6Q9Y217 621 aa11.56□□□□□ -0.56
RNF4-218ENST00000513284 MAN2B2Q9Y2E5 1009 aa11.56□□□□□ -0.56
RNF4-218ENST00000513284 CPED1A4D0V7 1026 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 EME2A4GXA9 379 aaPredicted RBP11.55□□□□□ -0.56
RNF4-218ENST00000513284 K7ELQ4 463 aaPredicted RBP11.55□□□□□ -0.56
RNF4-218ENST00000513284 IRAK2O43187 625 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 SLC7A4O43246 635 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 CUTAO60888 179 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 RNGTTO60942 597 aaKnown RBP11.55□□□□□ -0.56
RNF4-218ENST00000513284 GJB6O95452 261 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 YEATS4O95619 227 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 TRIM21P19474 475 aaKnown RBP11.55□□□□□ -0.56
RNF4-218ENST00000513284 CLDN2P57739 230 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 PPP3CAQ08209 521 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 ELAVL3Q14576 367 aaKnown RBP11.55□□□□□ -0.56
RNF4-218ENST00000513284 DRAP1Q14919 205 aaPredicted RBP11.55□□□□□ -0.56
RNF4-218ENST00000513284 CLCA4Q14CN2 919 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 ZNF284Q2VY69 593 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 DCAF6Q58WW2 860 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 MSANTD2Q6P1R3 559 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 UNC13DQ70J99 1090 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 EFL1Q7Z2Z2 1120 aaKnown RBP11.55□□□□□ -0.56
RNF4-218ENST00000513284 SLC9A9Q8IVB4 645 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 ARL14Q8N4G2 192 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 WDR36Q8NI36 951 aaKnown RBP11.55□□□□□ -0.56
RNF4-218ENST00000513284 RNF139Q8WU17 664 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 TATDN2Q93075 761 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 DHX58Q96C10 678 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 BMFQ96LC9 184 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 USP29Q9HBJ7 922 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 FZD3Q9NPG1 666 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 FAM13BQ9NYF5 915 aa11.55□□□□□ -0.56
RNF4-218ENST00000513284 SPTAN1Q13813 2472 aaKnown RBP11.55□□□□□ -0.56
RNF4-218ENST00000513284 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.54□□□□□ -0.56
RNF4-218ENST00000513284 HSP90AA1P07900 732 aaKnown RBP11.54□□□□□ -0.56
RNF4-218ENST00000513284 SLC5A2P31639 672 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 PIK3CAP42336 1068 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 CYP4F2P78329 520 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 ADIGQ0VDE8 80 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 ZNF177Q13360 481 aaPredicted RBP11.54□□□□□ -0.56
RNF4-218ENST00000513284 SERINC3Q13530 473 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 SETMARQ53H47 684 aaPredicted RBP11.54□□□□□ -0.56
RNF4-218ENST00000513284 HS1BP3Q53T59 392 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 MS4A13Q5J8X5 152 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 GCNT7Q6ZNI0 430 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 RBM44Q6ZP01 1051 aaKnown RBP11.54□□□□□ -0.56
RNF4-218ENST00000513284 ABI3BPQ7Z7G0 1075 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 HJURPQ8NCD3 748 aaPredicted RBP11.54□□□□□ -0.56
RNF4-218ENST00000513284 GOLGA5Q8TBA6 731 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 HTR3CQ8WXA8 447 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 SEMA4DQ92854 862 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 ARHGAP9Q9BRR9 750 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 CALN1Q9BXU9 219 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 NIF3L1Q9GZT8 377 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 NUCKS1Q9H1E3 243 aaKnown RBP11.54□□□□□ -0.56
RNF4-218ENST00000513284 BLZF1Q9H2G9 400 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 KCTD10Q9H3F6 313 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 GPR27Q9NS67 375 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 ABCC13Q9NSE7 274 aa11.54□□□□□ -0.56
RNF4-218ENST00000513284 XPO7Q9UIA9 1087 aaKnown RBP11.54□□□□□ -0.56
RNF4-218ENST00000513284 ZFR2Q9UPR6 939 aaKnown RBP11.54□□□□□ -0.56
RNF4-218ENST00000513284 NYNRINQ9P2P1 1898 aaKnown RBP11.54□□□□□ -0.56
RNF4-218ENST00000513284 A0A1W2PQU0 124 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 NEMP2A6NFY4 417 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 XPO1O14980 1071 aaKnown RBP11.53□□□□□ -0.56
RNF4-218ENST00000513284 LUC7L3O95232 432 aaKnown RBP11.53□□□□□ -0.56
RNF4-218ENST00000513284 FYNP06241 537 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 ITGA2BP08514 1039 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 ALPPL2P10696 532 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 MLLT3P42568 568 aaPredicted RBP11.53□□□□□ -0.56
RNF4-218ENST00000513284 GCLMP48507 274 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 SLC11A2P49281 568 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 DAOAP59103 153 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 FOXK1P85037 733 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 STK4Q13043 487 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 FZD2Q14332 565 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 PIP5KL1Q5T9C9 394 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 ZCCHC8Q6NZY4 707 aaKnown RBP11.53□□□□□ -0.56
RNF4-218ENST00000513284 Q6ZSR6 202 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 PTRH1Q86Y79 214 aaKnown RBP11.53□□□□□ -0.56
RNF4-218ENST00000513284 UNC45BQ8IWX7 931 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 ZNF557Q8N988 423 aaPredicted RBP11.53□□□□□ -0.56
RNF4-218ENST00000513284 UBA3Q8TBC4 463 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 ALG14Q96F25 216 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 IFT43Q96FT9 208 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 FCRL2Q96LA5 508 aaPredicted RBP11.53□□□□□ -0.56
RNF4-218ENST00000513284 SPAG5Q96R06 1193 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 DUSP23Q9BVJ7 150 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 SLC25A18Q9H1K4 315 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 CISHQ9NSE2 258 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 GEMIN8Q9NWZ8 242 aaKnown RBP11.53□□□□□ -0.56
RNF4-218ENST00000513284 DNAJC28Q9NX36 388 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms