RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-210	ENST00000513153	CADM3	Q8N126	398 aa		4.1	□□□□□ -1.75
LINC01088-210	ENST00000513153	OR2C3	Q8N628	320 aa		4.1	□□□□□ -1.75
LINC01088-210	ENST00000513153	KDM1B	Q8NB78	822 aa		4.1	□□□□□ -1.75
LINC01088-210	ENST00000513153	CCDC138	Q96M89	665 aa		4.1	□□□□□ -1.75
LINC01088-210	ENST00000513153	TM6SF1	Q9BZW5	370 aa		4.1	□□□□□ -1.75
LINC01088-210	ENST00000513153	RMI1	Q9H9A7	625 aa		4.1	□□□□□ -1.75
LINC01088-210	ENST00000513153	IGSF9	Q9P2J2	1179 aa		4.1	□□□□□ -1.75
LINC01088-210	ENST00000513153	SLC39A10	Q9ULF5	831 aa		4.1	□□□□□ -1.75
LINC01088-210	ENST00000513153	COPG1	Q9Y678	874 aa	Known RBP	4.1	□□□□□ -1.75
LINC01088-210	ENST00000513153	SLC4A4	Q9Y6R1	1079 aa		4.1	□□□□□ -1.75
LINC01088-210	ENST00000513153	KIF28P	B7ZC32	967 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	PIP5K1B	O14986	540 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	GLUD1	P00367	558 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	TNFSF8	P32971	234 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	GLUD2	P49448	558 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	GAS1	P54826	345 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	FAM3B	P58499	235 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	KRTAP10-12	P60413	245 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	RPL36A	P83881	106 aa	Known RBP	4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	DSC1	Q08554	894 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	LONRF1	Q17RB8	773 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	ARL13A	Q5H913	290 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	ANKS1B	Q7Z6G8	1248 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	IPO4	Q8TEX9	1081 aa	Known RBP	4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	CLEC4C	Q8WTT0	213 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	STK33	Q9BYT3	514 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	B3GNT4	Q9C0J1	378 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	CATSPERB	Q9H7T0	1116 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	CERS4	Q9HA82	394 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	FZD10	Q9ULW2	581 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	PCDHGB2	Q9Y5G2	931 aa		4.09	□□□□□ -1.75
LINC01088-210	ENST00000513153	TRBV5-7	A0A0A0MS05	114 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153		I6L893	689 aa	Predicted RBP	4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	LINC01565	O15544	149 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	DNPH1	O43598	174 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	LARGE1	O95461	756 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	CHRNB2	P17787	502 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	KLRC2	P26717	231 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	AKT1	P31749	480 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	SHB	Q15464	509 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	DUSP6	Q16828	381 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	PLK5	Q496M5	336 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	TMEM200A	Q86VY9	491 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	CCDC25	Q86WR0	208 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	C18orf8	Q96DM3	657 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	PRPF18	Q99633	342 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	MECR	Q9BV79	373 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	SORBS1	Q9BX66	1292 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	TMEM120A	Q9BXJ8	343 aa		4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	POLDIP3	Q9BY77	421 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	TP63	Q9H3D4	680 aa	Predicted RBP	4.08	□□□□□ -1.76
LINC01088-210	ENST00000513153	DOCK7	Q96N67	2140 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	STMND1	H3BQB6	276 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	PRSS2	P07478	247 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	PKM	P14618	531 aa	Known RBP	4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	HOXB9	P17482	250 aa	Predicted RBP	4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	ART1	P52961	327 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	PMS2	P54278	862 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	AK2	P54819	239 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	RHAG	Q02094	409 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	FSCB	Q5H9T9	825 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	VWA5B1	Q5TIE3	1220 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	ZNF367	Q7RTV3	350 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	TMEM217	Q8N7C4	229 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	CMAS	Q8NFW8	434 aa	Predicted RBP	4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	PARD3B	Q8TEW8	1205 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	RSC1A1	Q92681	617 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	MUL1	Q969V5	352 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	CHPF2	Q9P2E5	772 aa		4.07	□□□□□ -1.76
LINC01088-210	ENST00000513153	TCRBV7S3A2	A0A539	114 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	SLC38A8	A6NNN8	435 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	BTBD18	B2RXH4	712 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	MS4A18	H0YCH9	400 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	PARN	O95453	639 aa	Known RBP	4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	ZBTB16	Q05516	673 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	TRAF2	Q12933	501 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	IZUMO4	Q1ZYL8	232 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	SLC30A9	Q6PML9	568 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	PRSS57	Q6UWY2	283 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	KSR2	Q6VAB6	950 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153		Q6ZSV7	163 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	DPP10	Q8N608	796 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	BICD2	Q8TD16	824 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	ADAMTS14	Q8WXS8	1223 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	KIAA1191	Q96A73	305 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	NPAS1	Q99742	590 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	ZNF556	Q9HAH1	456 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	ARL15	Q9NXU5	204 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	CNTN6	Q9UQ52	1028 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	PKP3	Q9Y446	797 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153	PCDHGB1	Q9Y5G3	927 aa		4.06	□□□□□ -1.76
LINC01088-210	ENST00000513153		A0A1B0GUV1	79 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms