RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 KIAA1522Q9P206 1035 aaPredicted RBP12.85□□□□□ -0.35
PDPN-210ENST00000513143 OR51B4Q9Y5P0 310 aa12.85□□□□□ -0.35
PDPN-210ENST00000513143 TCF20Q9UGU0 1960 aaKnown RBP12.84□□□□□ -0.35
PDPN-210ENST00000513143 A0A0D9SEW6 157 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 GOLGA6L10A0A0M3HER8 536 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 ARHGAP42A6NI28 874 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 RASA4BC9J798 803 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 RASA4O43374 803 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 LIASO43766 372 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 MAP3K6O95382 1288 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 CISD3P0C7P0 127 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 MX2P20592 715 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 GJA4P35212 333 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 ETFBP38117 255 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 GARSP41250 739 aaKnown RBP12.84□□□□□ -0.35
PDPN-210ENST00000513143 PAPOLAP51003 745 aaKnown RBP12.84□□□□□ -0.35
PDPN-210ENST00000513143 LMAN2Q12907 356 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 TDGQ13569 410 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 SLC12A1Q13621 1099 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 PDK1Q15118 436 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 DRICH1Q6PGQ1 229 aaPredicted RBP12.84□□□□□ -0.35
PDPN-210ENST00000513143 KIAA0907Q7Z7F0 614 aaPredicted RBP12.84□□□□□ -0.35
PDPN-210ENST00000513143 C12orf40Q86WS4 652 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.84□□□□□ -0.35
PDPN-210ENST00000513143 NAT16Q8N8M0 369 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 C12orf50Q8NA57 414 aaPredicted RBP12.84□□□□□ -0.35
PDPN-210ENST00000513143 NETO2Q8NC67 525 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 SPATA4Q8NEY3 305 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 CSGALNACT1Q8TDX6 532 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 DNASE1L2Q92874 299 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 ARHGEF2Q92974 986 aaKnown RBP12.84□□□□□ -0.35
PDPN-210ENST00000513143 NKD2Q969F2 451 aaPredicted RBP12.84□□□□□ -0.35
PDPN-210ENST00000513143 HMCESQ96FZ2 354 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 FAM118BQ9BPY3 351 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 FEM1AQ9BSK4 669 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 ACE2Q9BYF1 805 aaPredicted RBP12.84□□□□□ -0.35
PDPN-210ENST00000513143 BRD8Q9H0E9 1235 aa12.84□□□□□ -0.35
PDPN-210ENST00000513143 HACD1B0YJ81 288 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 CCDC188H7C350 402 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 DFFAO00273 331 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 PPP1R12AO14974 1030 aaPredicted RBP12.83□□□□□ -0.36
PDPN-210ENST00000513143 MCF2LO15068 1137 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 TULP3O75386 442 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 BMP1P13497 986 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 MZF1P28698 734 aaPredicted RBP12.83□□□□□ -0.36
PDPN-210ENST00000513143 HLA-FP30511 346 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 CD70P32970 193 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 ACVRL1P37023 503 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 CSKP41240 450 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 PLK1P53350 603 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 EIF3EP60228 445 aaKnown RBP12.83□□□□□ -0.36
PDPN-210ENST00000513143 ZNF33AQ06730 810 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 SERINC3Q13530 473 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 BYSLQ13895 437 aaKnown RBP12.83□□□□□ -0.36
PDPN-210ENST00000513143 OASLQ15646 514 aaKnown RBP12.83□□□□□ -0.36
PDPN-210ENST00000513143 LCE2DQ5TA82 110 aaPredicted RBP12.83□□□□□ -0.36
PDPN-210ENST00000513143 RNF219Q5W0B1 726 aaPredicted RBP12.83□□□□□ -0.36
PDPN-210ENST00000513143 CCDC33Q8N5R6 958 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 CEP112Q8N8E3 955 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 MNS1Q8NEH6 495 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 OR7D4Q8NG98 312 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 TTC8Q8TAM2 541 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 MAGOHBQ96A72 148 aaKnown RBP12.83□□□□□ -0.36
PDPN-210ENST00000513143 HDAC11Q96DB2 347 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 CHFRQ96EP1 664 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 TSGA13Q96PP4 275 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 ASB2Q96Q27 587 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 MUC3BQ9H195 1237 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 RBM12Q9NTZ6 932 aaKnown RBP12.83□□□□□ -0.36
PDPN-210ENST00000513143 ABCB8Q9NUT2 735 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 DNAJC17Q9NVM6 304 aaKnown RBP12.83□□□□□ -0.36
PDPN-210ENST00000513143 DNPEPQ9ULA0 475 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 SLC27A6Q9Y2P4 619 aa12.83□□□□□ -0.36
PDPN-210ENST00000513143 BCLAF3A2AJT9 711 aaKnown RBP12.82□□□□□ -0.36
PDPN-210ENST00000513143 H7C0C1 242 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 KDELR3O43731 214 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 MAFKO60675 156 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 PHF2O75151 1096 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 RBP3P10745 1247 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 SRFP11831 508 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 PABPC1P11940 636 aaKnown RBP12.82□□□□□ -0.36
PDPN-210ENST00000513143 OPRD1P41143 372 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 EIF2DP41214 584 aaKnown RBP12.82□□□□□ -0.36
PDPN-210ENST00000513143 ATP5OP48047 213 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 SLC6A11P48066 632 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 DGKGP49619 791 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 PPIDQ08752 370 aaKnown RBP12.82□□□□□ -0.36
PDPN-210ENST00000513143 SNX1Q13596 522 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 PRKD1Q15139 912 aaPredicted RBP12.82□□□□□ -0.36
PDPN-210ENST00000513143 PLEKHG6Q3KR16 790 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 SLC45A4Q5BKX6 768 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 IL31Q6EBC2 164 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 ARHGAP36Q6ZRI8 547 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 ZC3H18Q86VM9 953 aaKnown RBP12.82□□□□□ -0.36
PDPN-210ENST00000513143 APCDD1Q8J025 514 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 ATPAF2Q8N5M1 289 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 TFB1MQ8WVM0 346 aaKnown RBP12.82□□□□□ -0.36
PDPN-210ENST00000513143 FATE1Q969F0 183 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 QKIQ96PU8 341 aaKnown RBP eCLIP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms