RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TRIM69Q86WT6 500 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 APCDD1Q8J025 514 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 STK40Q8N2I9 435 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 AADATQ8N5Z0 425 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 FAM174AQ8TBP5 190 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 OR8D1Q8WZ84 308 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 NXPE2Q96DL1 559 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 MYEOVQ96EZ4 313 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 NOX5Q96PH1 765 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 UBE2TQ9NPD8 197 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-216ENST00000512683 RRN3Q9NYV6 651 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 PPM1HQ9ULR3 514 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-216ENST00000512683 ADAMTS9Q9P2N4 1935 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 FREM2Q5SZK8 3169 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-216ENST00000512683 E5RJQ4 531 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 C1QTNF3-AMACRE9PGA6 284 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 PRAMEF26H0Y7S4 382 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 TK2O00142 265 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 PLRG1O43660 514 aaKnown RBP12.94□□□□□ -0.34
VEGFA-216ENST00000512683 HSF2BPO75031 334 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 LETM1O95202 739 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-216ENST00000512683 KRT5P13647 590 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 CKMT2P17540 419 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 EPHA8P29322 1005 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-216ENST00000512683 GNA15P30679 374 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 CTSOP43234 321 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-216ENST00000512683 ZNF177Q13360 481 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-216ENST00000512683 C5orf22Q49AR2 442 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 SFMBT2Q5VUG0 894 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 DENND1BQ6P3S1 775 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-216ENST00000512683 ZDHHC17Q8IUH5 632 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 CCAR2Q8N163 923 aaKnown RBP12.94□□□□□ -0.34
VEGFA-216ENST00000512683 ADAM32Q8TC27 787 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 RFFLQ8WZ73 363 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 RPL10LQ96L21 214 aaKnown RBP12.94□□□□□ -0.34
VEGFA-216ENST00000512683 SLC2A13Q96QE2 648 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 FEM1AQ9BSK4 669 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 PREBQ9HCU5 417 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 ARHGAP20Q9P2F6 1191 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 CYTH4Q9UIA0 394 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 PCDHGC3Q9UN70 934 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 TBC1D30Q9Y2I9 924 aa12.94□□□□□ -0.34
VEGFA-216ENST00000512683 MUC22E2RYF6 1773 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-216ENST00000512683 GTPBP10A4D1E9 387 aaKnown RBP12.93□□□□□ -0.34
VEGFA-216ENST00000512683 EIF4E1BA6NMX2 242 aaKnown RBP12.93□□□□□ -0.34
VEGFA-216ENST00000512683 RIOK3O14730 519 aaKnown RBP12.93□□□□□ -0.34
VEGFA-216ENST00000512683 SLC9A1P19634 815 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 DRD3P35462 400 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 PSMD8P48556 350 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 ACADVLP49748 655 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 KRT83P78385 493 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 APBA1Q02410 837 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 ZNF211Q13398 564 aaPredicted RBP12.93□□□□□ -0.34
VEGFA-216ENST00000512683 SETMARQ53H47 684 aaPredicted RBP12.93□□□□□ -0.34
VEGFA-216ENST00000512683 FBXL22Q6P050 247 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 GJB7Q6PEY0 223 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 TRIM65Q6PJ69 517 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 LAYNQ6UX15 382 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 GATAD2AQ86YP4 633 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 EID2Q8N6I1 236 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 MLKLQ8NB16 471 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 RNF34Q969K3 372 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 ALG14Q96F25 216 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 IFT43Q96FT9 208 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 LRIG1Q96JA1 1093 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 CRACR2AQ9BSW2 395 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 CLSTN2Q9H4D0 955 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 XPO7Q9UIA9 1087 aaKnown RBP12.93□□□□□ -0.34
VEGFA-216ENST00000512683 SLC25A13Q9UJS0 675 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 PAXBP1Q9Y5B6 917 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 OR51B4Q9Y5P0 310 aa12.93□□□□□ -0.34
VEGFA-216ENST00000512683 BECN2A8MW95 431 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 RRP8O43159 456 aaKnown RBP12.92□□□□□ -0.34
VEGFA-216ENST00000512683 THAP12O43422 761 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 F9P00740 461 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 PDGFRAP16234 1089 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 ZNF18P17022 549 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 ACP1P24666 158 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 NOS2P35228 1153 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 CLCN6P51797 869 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 CDH4P55283 916 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 IL9RQ01113 521 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 PTK2Q05397 1052 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 PDCLQ13371 301 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 AUHQ13825 339 aaKnown RBP12.92□□□□□ -0.34
VEGFA-216ENST00000512683 DLG2Q15700 870 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 HS1BP3Q53T59 392 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 PRAMEF14Q5SWL7 426 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 CXorf57Q6NSI4 855 aaKnown RBP12.92□□□□□ -0.34
VEGFA-216ENST00000512683 FBXL19Q6PCT2 694 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 LRRC69Q6ZNQ3 347 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 C11orf57Q6ZUT1 292 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-216ENST00000512683 KANSL1Q7Z3B3 1105 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 ZSCAN30Q86W11 494 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 DCP2Q8IU60 420 aaKnown RBP12.92□□□□□ -0.34
VEGFA-216ENST00000512683 DEFB106AQ8N104 65 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 C1orf131Q8NDD1 294 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms