RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 PTPN2P17706 415 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 EIF4BP23588 611 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SREBF1P36956 1147 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ETV6P41212 452 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 DNM2P50570 870 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 RPS6KA3P51812 740 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 PDE1BQ01064 536 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CDK18Q07002 472 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 DHX34Q14147 1143 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 PHKG1Q16816 387 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TCTN1Q2MV58 587 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF800Q2TB10 664 aaPredicted RBP eCLIP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 NBPF20Q3BBV1 942 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRRC23Q53EV4 343 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 WDR44Q5JSH3 913 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANKRD34AQ69YU3 496 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 DLEU7Q6UYE1 221 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 C4orf50Q6ZRC1 276 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SERINC5Q86VE9 423 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 DIS3L2Q8IYB7 885 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADGRG5Q8IZF4 528 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 BEND7Q8N7W2 519 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 BBOF1Q8ND07 529 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 APPL2Q8NEU8 664 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 STK32AQ8WU08 396 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 VPS33AQ96AX1 596 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF414Q96IQ9 312 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 LOXL4Q96JB6 756 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 KLHL15Q96M94 604 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 GCNAQ96QF7 691 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRFN3Q9BTN0 628 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CELF4Q9BZC1 486 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIM6Q9C030 488 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 VPS11Q9H270 941 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ECT2Q9H8V3 914 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 GPRC5CQ9NQ84 441 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TXLNGQ9NUQ3 528 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 FBXL12Q9NXK8 326 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CPSF2Q9P2I0 782 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SCOCQ9UIL1 159 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAF1Q9UNN5 650 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC4A4Q9Y6R1 1079 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 HCFC1P51610 2035 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 DENRO43583 198 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 DUSP11O75319 330 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMCC1O94876 653 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 HEXIM1O94992 359 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 GLP2RO95838 553 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 PARP1P09874 1014 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 IDUAP35475 653 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAGEA2P43356 314 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SUOXP51687 545 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CLCNKBP51801 687 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 DMWDQ09019 674 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CNTN1Q12860 1018 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 MED21Q13503 144 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 DCTN2Q13561 401 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT33BQ14525 404 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC9A5Q14940 896 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 PSMD6Q15008 389 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 KARSQ15046 597 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TUBB8Q3ZCM7 444 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TAF1BQ53T94 588 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SFT2D3Q587I9 215 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 C11orf63Q6NUN7 778 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM117BQ6P1L5 589 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRIG3Q6UXM1 1119 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 MED25Q71SY5 747 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 NIPA1Q7RTP0 329 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CAMK1DQ8IU85 385 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TEX11Q8IYF3 940 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ST13P4Q8IZP2 240 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 RAB42Q8N4Z0 105 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 EFHBQ8N7U6 833 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CNNM3Q8NE01 707 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 MDM1Q8TC05 714 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 U2AF1L4Q8WU68 220 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TFAP2BQ92481 460 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 MSANTD3Q96H12 275 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SERAC1Q96JX3 654 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 NT5C1BQ96P26 610 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRRC37BQ96QE4 947 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 BCO2Q9BYV7 579 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIM8Q9BZR9 551 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SPRY4Q9C004 299 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 IRF2BPLQ9H1B7 796 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SMARCAD1Q9H4L7 1026 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 BARX1Q9HBU1 254 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 WDR6Q9NNW5 1121 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ACKR4Q9NPB9 350 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 AKIP1Q9NQ31 210 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CLEC1BQ9P126 229 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 IPO11Q9UI26 975 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SATB2Q9UPW6 733 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM50BQ9Y247 325 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TCAF1Q9Y4C2 921 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CLDN16Q9Y5I7 305 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 PSAT1Q9Y617 370 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 KIAA1109Q2LD37 5005 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SF3B1O75533 1304 aaKnown RBP eCLIP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms