RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 ASPHQ12797 758 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 CUL3Q13618 768 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 EFTUD2Q15029 972 aaKnown RBP eCLIP13.17□□□□□ -0.38e-12■■■■■ 30.8
HMGB2-205ENST00000511316 TPSAB1Q15661 275 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 DUSP6Q16828 381 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 INSCQ1MX18 579 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 C1orf146Q5VVC0 180 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 PDE12Q6L8Q7 609 aaKnown RBP13.17□□□□□ -0.3
HMGB2-205ENST00000511316 TMC7Q7Z402 723 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 RBM23Q86U06 439 aaKnown RBP13.17□□□□□ -0.3
HMGB2-205ENST00000511316 TMEM126BQ8IUX1 230 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.17□□□□□ -0.32e-6■■□□□ 12
HMGB2-205ENST00000511316 ULK2Q8IYT8 1036 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 FAM71DQ8N9W8 422 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 OR5B17Q8NGF7 314 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 GSDMBQ8TAX9 411 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 CDKL2Q92772 493 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
HMGB2-205ENST00000511316 CMTM5Q96DZ9 223 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 SERAC1Q96JX3 654 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 B3GALT6Q96L58 329 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 ECSITQ9BQ95 431 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 NAT9Q9BTE0 207 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 NMUR2Q9GZQ4 415 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 ZWILCHQ9H900 591 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 FBXO6Q9NRD1 293 aaPredicted RBP13.17□□□□□ -0.3
HMGB2-205ENST00000511316 ADAM28Q9UKQ2 775 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 ITGA11Q9UKX5 1188 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 USP18Q9UMW8 372 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 TTC28Q96AY4 2481 aa13.17□□□□□ -0.3
HMGB2-205ENST00000511316 SMIM31A0A1B0GVY4 71 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 CARNS1A5YM72 827 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 TMEM189-UBE2V1I3L0A0 370 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 PEX1O43933 1283 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 CXCL14O95715 111 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 CALCAP01258 141 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 SOD2P04179 222 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 BMP1P13497 986 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 NRIP1P48552 1158 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 GDF10P55107 478 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 DYNLT1P63172 113 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 STX3Q13277 289 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 PLPP4Q5VZY2 271 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 TMEM184AQ6ZMB5 413 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 UNC45BQ8IWX7 931 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 CXorf38Q8TB03 319 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 PPP4R1Q8TF05 950 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 STON2Q8WXE9 905 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 NCSTNQ92542 709 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 BTBD9Q96Q07 612 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 FERMT1Q9BQL6 677 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 BCO2Q9BYV7 579 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 SDCBP2Q9H190 292 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 EPB41L1Q9H4G0 881 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 Q9H521 79 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 PLA2G4CQ9UP65 541 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 APOBEC2Q9Y235 224 aaKnown RBP13.16□□□□□ -0.3
HMGB2-205ENST00000511316 HBS1LQ9Y450 684 aaKnown RBP13.16□□□□□ -0.3
HMGB2-205ENST00000511316 CITO14578 2027 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 H7C0C1 242 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 GOLGA8RI6L899 631 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 PRPSAP2O60256 369 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 CCNT2O60583 730 aaKnown RBP13.16□□□□□ -0.3
HMGB2-205ENST00000511316 GLRA3O75311 464 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 ERBB2P04626 1255 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 BPGMP07738 259 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 LYNP07948 512 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 MLNP12872 115 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 TCF4P15884 667 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 ATP5OP48047 213 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 HK2P52789 917 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 MYL6P60660 151 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 BST1Q10588 318 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 PTPN20Q4JDL3 420 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 TEX44Q53QW1 395 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 ZNF667Q5HYK9 610 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 EFHC1Q5JVL4 640 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 XYLT1Q86Y38 959 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 CTAGE3PQ8IX95 158 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 WDTC1Q8N5D0 677 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 EFHBQ8N7U6 833 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 RBM15BQ8NDT2 890 aaKnown RBP13.16□□□□□ -0.3
HMGB2-205ENST00000511316 PPP1R14CQ8TAE6 165 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 NRG4Q8WWG1 115 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 HLA-CQ95604 372 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 MSLNLQ96KJ4 702 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 WDR83Q9BRX9 315 aaKnown RBP13.16□□□□□ -0.3
HMGB2-205ENST00000511316 CCDC106Q9BWC9 280 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 COLEC11Q9BWP8 271 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 UBE2ZQ9H832 354 aaPredicted RBP13.16□□□□□ -0.3
HMGB2-205ENST00000511316 VRTNQ9H8Y1 702 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 MRGBPQ9NV56 204 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 TUBGCP4Q9UGJ1 667 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 TTLL3Q9Y4R7 772 aa13.16□□□□□ -0.3
HMGB2-205ENST00000511316 DPYSL4O14531 572 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 APOL1O14791 398 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 CLASP2O75122 1294 aaKnown RBP13.15□□□□□ -0.3
HMGB2-205ENST00000511316 H2AFYO75367 372 aaKnown RBP13.15□□□□□ -0.3
HMGB2-205ENST00000511316 ZBED1O96006 694 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 CNPP09543 421 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms