RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 STARD3Q14849 445 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 ARID5BQ14865 1188 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 CCDC122Q5T0U0 273 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 TTC39BQ5VTQ0 682 aaPredicted RBP13.93□□□□□ -0.18
SNF8-206ENST00000509989 SARM1Q6SZW1 724 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 LEKR1Q6ZMV7 388 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 SLFN11Q7Z7L1 901 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 STK40Q8N2I9 435 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 OR2T3Q8NH03 318 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 FRS2Q8WU20 508 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 NTAN1Q96AB6 310 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 FAM129BQ96TA1 746 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 KLC2Q9H0B6 622 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 OSBPL2Q9H1P3 480 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 NOL6Q9H6R4 1146 aaKnown RBP13.93□□□□□ -0.18
SNF8-206ENST00000509989 FSCN3Q9NQT6 498 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 SPTLC3Q9NUV7 552 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 PARVAQ9NVD7 372 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 USP36Q9P275 1121 aaKnown RBP13.93□□□□□ -0.18
SNF8-206ENST00000509989 DNAI1Q9UI46 699 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 VPS51Q9UID3 782 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 RAB23Q9ULC3 237 aa13.93□□□□□ -0.18
SNF8-206ENST00000509989 SHROOM3Q8TF72 1996 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 NPC1O15118 1278 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 MFAP3LO75121 409 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 ZMPSTE24O75844 475 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 CD160O95971 181 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 ASLP04424 464 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 MAOBP27338 520 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 IL1R2P27930 398 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 MIPP30301 263 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 CREB5Q02930 508 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 SCAPQ12770 1279 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 HNRNPA1L2Q32P51 320 aaKnown RBP13.92□□□□□ -0.18
SNF8-206ENST00000509989 RWDD4Q6NW29 188 aaKnown RBP13.92□□□□□ -0.18
SNF8-206ENST00000509989 ALKBH5Q6P6C2 394 aaKnown RBP13.92□□□□□ -0.18
SNF8-206ENST00000509989 LRRC31Q6UY01 552 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 SIPA1Q96FS4 1042 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 KCTD15Q96SI1 283 aaPredicted RBP13.92□□□□□ -0.18
SNF8-206ENST00000509989 SNRNP25Q9BV90 132 aaKnown RBP13.92□□□□□ -0.18
SNF8-206ENST00000509989 TRIM5Q9C035 493 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 ZYG11BQ9C0D3 744 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 MUC3BQ9H195 1237 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 ITM2CQ9NQX7 267 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 SEMA4GQ9NTN9 838 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 ABHD10Q9NUJ1 306 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 VPS28Q9UK41 221 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 GMEB2Q9UKD1 530 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 USP18Q9UMW8 372 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 MFHAS1Q9Y4C4 1052 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 TMEM131Q92545 1883 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 PCDH15Q96QU1 1955 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 DCHS1Q96JQ0 3298 aa13.92□□□□□ -0.18
SNF8-206ENST00000509989 BCLAF3A2AJT9 711 aaKnown RBP13.91□□□□□ -0.18
SNF8-206ENST00000509989 CREB3O43889 395 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 LRCH4O75427 683 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 SRPRAP08240 638 aaKnown RBP13.91□□□□□ -0.18
SNF8-206ENST00000509989 SRCP12931 536 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 ITPKAP23677 461 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 OR1E1P30953 314 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 ACSL1P33121 698 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 MPLP40238 635 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 ZNF75DP51815 510 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 ARF5P84085 180 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 NRG1Q02297 640 aaPredicted RBP13.91□□□□□ -0.18
SNF8-206ENST00000509989 RPL6Q02878 288 aaKnown RBP13.91□□□□□ -0.18
SNF8-206ENST00000509989 PLA2G2CQ5R387 149 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 Q6ZVU0 165 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 MMAAQ8IVH4 418 aaKnown RBP13.91□□□□□ -0.18
SNF8-206ENST00000509989 CCDC117Q8IWD4 279 aaPredicted RBP13.91□□□□□ -0.18
SNF8-206ENST00000509989 TP53INP2Q8IXH6 220 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 TC2NQ8N9U0 490 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 OR8K1Q8NGG5 319 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 TOE1Q96GM8 510 aaKnown RBP13.91□□□□□ -0.18
SNF8-206ENST00000509989 SPON2Q9BUD6 331 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 NUP85Q9BW27 656 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 WSB2Q9NYS7 404 aaPredicted RBP13.91□□□□□ -0.18
SNF8-206ENST00000509989 PPARGC1AQ9UBK2 798 aaKnown RBP13.91□□□□□ -0.18
SNF8-206ENST00000509989 SARDHQ9UL12 918 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 TFR2Q9UP52 801 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 PAXBP1Q9Y5B6 917 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 ANKRD36A6QL64 1941 aa13.91□□□□□ -0.18
SNF8-206ENST00000509989 MID1O15344 667 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 MAP3K13O43283 966 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 ZNF821O75541 412 aaPredicted RBP13.9□□□□□ -0.18
SNF8-206ENST00000509989 MOCS3O95396 460 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 CYP1A2P05177 515 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 CTSLP07711 333 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 RHOQP17081 205 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 ST8SIA6P61647 398 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 GNA12Q03113 381 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 MAPK8IP2Q13387 824 aaPredicted RBP13.9□□□□□ -0.18
SNF8-206ENST00000509989 SLC12A1Q13621 1099 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 DLG2Q15700 870 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 ARL13BQ3SXY8 428 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 POM121L1PQ3SYA9 428 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 ACCSLQ4AC99 568 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 KCNT1Q5JUK3 1230 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 SETD3Q86TU7 594 aaPredicted RBP13.9□□□□□ -0.18
SNF8-206ENST00000509989 SH2D3CQ8N5H7 860 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms