RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 PGRMC1O00264 195 aaKnown RBP7.53□□□□□ -1.2
TRIO-213ENST00000509354 KCNK3O14649 394 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 HOXC11O43248 304 aaPredicted RBP7.53□□□□□ -1.2
TRIO-213ENST00000509354 MSI1O43347 362 aaKnown RBP7.53□□□□□ -1.2
TRIO-213ENST00000509354 ENDOD1O94919 500 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 ZBED1O96006 694 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 KLKB1P03952 638 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 LCP1P13796 627 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 HNRNPLP14866 589 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRIO-213ENST00000509354 ATP5C1P36542 298 aaKnown RBP7.53□□□□□ -1.2
TRIO-213ENST00000509354 PAFAH1B1P43034 410 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 PLA2G4AP47712 749 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 NAP1L1P55209 391 aaKnown RBP7.53□□□□□ -1.2
TRIO-213ENST00000509354 YWHAGP61981 247 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRIO-213ENST00000509354 OGDHQ02218 1023 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 KLF1Q13351 362 aaPredicted RBP7.53□□□□□ -1.2
TRIO-213ENST00000509354 DMC1Q14565 340 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 ANO4Q32M45 955 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 C2orf27AQ580R0 203 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 EMC10Q5UCC4 262 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 PRR23BQ6ZRT6 265 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 PRICKLE2Q7Z3G6 844 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 BNIPLQ7Z465 357 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 ERICH1Q86X53 443 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 ETFBKMTQ8IXQ9 262 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 KATNAL2Q8IYT4 538 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 SYNPOQ8N3V7 929 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 CCDC33Q8N5R6 958 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 C12orf50Q8NA57 414 aaPredicted RBP7.53□□□□□ -1.2
TRIO-213ENST00000509354 FAM71BQ8TC56 605 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 USP33Q8TEY7 942 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.53□□□□□ -1.22e-6■■■■■ 55.4
TRIO-213ENST00000509354 KCTD13Q8WZ19 329 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 EDEM1Q92611 657 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 KRT35Q92764 455 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 MS4A14Q96JA4 679 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 CPXM1Q96SM3 734 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 PNKPQ96T60 521 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 C11orf70Q9BRQ4 267 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 SELENOOQ9BVL4 669 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 UBXN6Q9BZV1 441 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 TRIM7Q9C029 511 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 MIS12Q9H081 205 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 PARD6AQ9NPB6 346 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 GDF3Q9NR23 364 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 ARHGEF4Q9NR80 690 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 SPHK2Q9NRA0 654 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 SEPT11Q9NVA2 429 aaKnown RBP7.53□□□□□ -1.2
TRIO-213ENST00000509354 ZNF446Q9NWS9 450 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 TBC1D14Q9P2M4 693 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 NCDNQ9UBB6 729 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 IP6K2Q9UHH9 426 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 DNMT3LQ9UJW3 386 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 EFR3BQ9Y2G0 817 aa7.53□□□□□ -1.2
TRIO-213ENST00000509354 CNOT1A5YKK6 2376 aaKnown RBP7.53□□□□□ -1.2
TRIO-213ENST00000509354 SLC12A8A0AV02 714 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 FAM170AA1A519 330 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 NEDD8-MDP1E9PL57 170 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 MAP2K7O14733 419 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 TULP3O75386 442 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 KAT7O95251 611 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 ERBB2P04626 1255 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 APODP05090 189 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 RALAP11233 206 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 MCM3P25205 808 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 CORO1AP31146 461 aaKnown RBP7.52□□□□□ -1.21
TRIO-213ENST00000509354 CXCR5P32302 372 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 MARCKSL1P49006 195 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 DRG2P55039 364 aaKnown RBP7.52□□□□□ -1.21
TRIO-213ENST00000509354 RWDD2BP57060 319 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 DAOAP59103 153 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 RPL7AP62424 266 aaKnown RBP7.52□□□□□ -1.21
TRIO-213ENST00000509354 PIGHQ14442 188 aaPredicted RBP7.52□□□□□ -1.21
TRIO-213ENST00000509354 PPP2R5DQ14738 602 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 TEAD4Q15561 434 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 BEND6Q5SZJ8 279 aaPredicted RBP7.52□□□□□ -1.21
TRIO-213ENST00000509354 PM20D1Q6GTS8 502 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 PMF1Q6P1K2 205 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 KLHDC10Q6PID8 442 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 TPGS1Q6ZTW0 290 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 HTR3DQ70Z44 454 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 WDR5BQ86VZ2 330 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 LONP2Q86WA8 852 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 VSIG1Q86XK7 387 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 CPNE8Q86YQ8 564 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 PASD1Q8IV76 773 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 KIAA2013Q8IYS2 634 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 SIX6OS1Q8N1H7 587 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 SCML4Q8N228 414 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 ALLCQ8N6M5 410 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 ARFGAP1Q8N6T3 406 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 UBL4BQ8N7F7 174 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 EXD1Q8NHP7 514 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 ACDQ96AP0 544 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 OTUB2Q96DC9 234 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 C18orf8Q96DM3 657 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 ERLEC1Q96DZ1 483 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 HSFY1Q96LI6 401 aa7.52□□□□□ -1.21
TRIO-213ENST00000509354 NAP1L3Q99457 506 aaPredicted RBP7.52□□□□□ -1.21
TRIO-213ENST00000509354 BBS2Q9BXC9 721 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms