RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 NDUFS2O75306 463 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 MT-CO1P00395 513 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 PLEKP08567 350 aaPredicted RBP16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 ACADMP11310 421 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 NNMTP40261 264 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 ZBTB16Q05516 673 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 PUM1Q14671 1186 aaKnown RBP eCLIP16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 MANEALQ5VSG8 457 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 PEAR1Q5VY43 1037 aaPredicted RBP16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 TCEAL6Q6IPX3 200 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 DCUN1D2Q6PH85 259 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 ARMCX6Q7L4S7 300 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 CYP2U1Q7Z449 544 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 CADM4Q8NFZ8 388 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 TCEAL3Q969E4 200 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 IQCDQ96DY2 449 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 MCEEQ96PE7 176 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 GPR174Q9BXC1 333 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 ZYG11BQ9C0D3 744 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 RETREG1Q9H6L5 497 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 ADAMTS1Q9UHI8 967 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 NUMA1Q14980 2115 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 NUP205Q92621 2012 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 PLXND1Q9Y4D7 1925 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 EDDM13A0A1B0GTR0 161 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 METTL12A8MUP2 240 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 TM4SF5O14894 197 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 KHNYNO15037 678 aaKnown RBP16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 CCP110O43303 1012 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 GYPCP04921 128 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 SDHBP21912 280 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 OR1E1P30953 314 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 SCAPQ12770 1279 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 DLG2Q15700 870 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 LYSMD4Q5XG99 296 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 TFAP2DQ7Z6R9 452 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 SLFN11Q7Z7L1 901 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 STK40Q8N2I9 435 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 ARFGAP1Q8N6T3 406 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 C12orf50Q8NA57 414 aaPredicted RBP16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 DNASE2BQ8WZ79 361 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 MUC3BQ9H195 1237 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 VPS28Q9UK41 221 aa16.56■□□□□ 0.24
PDLIM5-212ENST00000509333 SLC30A4O14863 429 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 SNAP91O60641 907 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 ZMPSTE24O75844 475 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 LRIG2O94898 1065 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 SERPING1P05155 500 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 RHOCP08134 193 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 VAV1P15498 845 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 MAOBP27338 520 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 HNRNPH3P31942 346 aaKnown RBP16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 CASP14P31944 242 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 L1CAMP32004 1257 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 ACSL1P33121 698 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 LIMK1P53667 647 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 C6orf118Q5T5N4 469 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 ZNF776Q68DI1 518 aaPredicted RBP16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 SCYL2Q6P3W7 929 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 ZNF783Q6ZMS7 281 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 NLRP14Q86W24 1093 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 DRC7Q8IY82 874 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 SH2D3CQ8N5H7 860 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 OR7D4Q8NG98 312 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 NETO1Q8TDF5 533 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 FOXJ1Q92949 421 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 NDFIP2Q9NV92 336 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 CNOT8Q9UFF9 292 aaKnown RBP16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 EVLQ9UI08 416 aaPredicted RBP16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 DCHS1Q96JQ0 3298 aa16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 CNOT1A5YKK6 2376 aaKnown RBP16.55■□□□□ 0.24
PDLIM5-212ENST00000509333 ANKRD62A6NC57 917 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 RNASEH1O60930 286 aaKnown RBP16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 DNTTP04053 509 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 RHOQP17081 205 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 SLC8A1P32418 973 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 DPP6P42658 865 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 KRT83P78385 493 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 ACCSLQ4AC99 568 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 SLC23A3Q6PIS1 610 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 FAM124AQ86V42 546 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 CACUL1Q86Y37 369 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 MMAAQ8IVH4 418 aaKnown RBP16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 PYROXD2Q8N2H3 581 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 RNF214Q8ND24 703 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 HSPA12BQ96MM6 686 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 SPON2Q9BUD6 331 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 ACE2Q9BYF1 805 aaPredicted RBP16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 TRIM7Q9C029 511 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 PABPC3Q9H361 631 aaKnown RBP16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 VPS51Q9UID3 782 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 FZD10Q9ULW2 581 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 SCML1Q9UN30 329 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 HS3ST2Q9Y278 367 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 DOCK4Q8N1I0 1966 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 CEP192Q8TEP8 1941 aa16.54■□□□□ 0.24
PDLIM5-212ENST00000509333 A0A087X0T9 212 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 K7ERQ8 282 aa16.53■□□□□ 0.24
PDLIM5-212ENST00000509333 CDX4O14627 284 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms