RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 IL1R2P27930 398 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 CCR1P32246 355 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 EIF4A3P38919 411 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 CXCL12P48061 93 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 STK19P49842 368 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 ADKP55263 362 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 TAGLNQ01995 201 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 DEUP1Q05D60 604 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 GFPT1Q06210 699 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 SCAPQ12770 1279 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 ZNF234Q14588 700 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 CRY1Q16526 586 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 FBXO43Q4G163 708 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 MPPE1Q53F39 396 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 TDRD12Q587J7 1177 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 PITRM1Q5JRX3 1037 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 SPECC1LQ69YQ0 1117 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 TMC6Q7Z403 805 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 WDR5BQ86VZ2 330 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 NLRP14Q86W24 1093 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 CACUL1Q86Y37 369 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 CCAR2Q8N163 923 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 ZNF513Q8N8E2 541 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 NETO2Q8NC67 525 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 HJURPQ8NCD3 748 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 DDI1Q8WTU0 396 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 ATRIPQ8WXE1 791 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 SYN2Q92777 582 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 GOLGA1Q92805 767 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 ZNF653Q96CK0 615 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 RBCK1Q9BYM8 510 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 MKRN2Q9H000 416 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 EPC1Q9H2F5 836 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 PDCL3Q9H2J4 239 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 TMEM245Q9H330 911 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 PARD6AQ9NPB6 346 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 SPTLC3Q9NUV7 552 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 MPP6Q9NZW5 540 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 WDR35Q9P2L0 1181 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 EBF1Q9UH73 591 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 ADAMTS1Q9UHI8 967 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 MBD1Q9UIS9 605 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 TFR2Q9UP52 801 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 ZNF510Q9Y2H8 683 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 REXO2Q9Y3B8 237 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 STON1Q9Y6Q2 735 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 RIF1Q5UIP0 2472 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 FAM186AA6NE01 2351 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 PCDH15Q96QU1 1955 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 NUMA1Q14980 2115 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 A0A0D9SEW6 157 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 TCRBV21S2A2A0A5A6 115 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 SIGLEC16A6NMB1 481 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 E9PAM4 449 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 SNAP91O60641 907 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 LRCH4O75427 683 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 ZMPSTE24O75844 475 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 CD160O95971 181 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 RECKO95980 971 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 APOEP02649 317 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 FTLP02792 175 aaPredicted RBP7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 SERPING1P05155 500 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 CYP1A2P05177 515 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 CALB1P05937 261 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 KRT3P12035 628 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 HOXB2P14652 356 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 PDGFRAP16234 1089 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 ABCB4P21439 1286 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 TGM1P22735 817 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 MAPK1P28482 360 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 HOXA6P31267 233 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 CHKAP35790 457 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 TNFRSF4P43489 277 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 SLC11A2P49281 568 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 ZNF143P52747 638 aaPredicted RBP7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 MRPS21P82921 87 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 SLC25A11Q02978 314 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 LPAL2Q16609 132 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 PLEKHG6Q3KR16 790 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 BRMS1LQ5PSV4 323 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 MPP7Q5T2T1 576 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 MBLAC2Q68D91 279 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 ANO7Q6IWH7 933 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 CHST9Q7L1S5 443 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 STRADAQ7RTN6 431 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 TFAP2DQ7Z6R9 452 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 MFN1Q8IWA4 741 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 UNC45BQ8IWX7 931 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 TP53INP2Q8IXH6 220 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 CARNMT1Q8N4J0 409 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 DCLK2Q8N568 766 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 OR7D4Q8NG98 312 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 FIBINQ8TAL6 211 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 ATOH1Q92858 354 aaPredicted RBP7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 NTAN1Q96AB6 310 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 TTC17Q96AE7 1141 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 TMA16Q96EY4 203 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 ZNF419Q96HQ0 510 aaPredicted RBP7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 SNRNP25Q9BV90 132 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 TRIM62Q9BVG3 475 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms