RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 K7ERQ8 282 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 RNF103O00237 685 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 SYNCRIPO60506 623 aaKnown RBP18.65■□□□□ 0.58
CLDND1-220ENST00000508902 LRCH4O75427 683 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 CD160O95971 181 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 CYP1A2P05177 515 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 SRPRAP08240 638 aaKnown RBP18.65■□□□□ 0.58
CLDND1-220ENST00000508902 IL1R2P27930 398 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 ACVRL1P37023 503 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 TPMTP51580 245 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 METAP1P53582 386 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 MAPK8IP2Q13387 824 aaPredicted RBP18.65■□□□□ 0.58
CLDND1-220ENST00000508902 TRIM14Q14142 442 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 TCEAL6Q6IPX3 200 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 PPP1R2P3Q6NXS1 205 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 SCYL2Q6P3W7 929 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 ALKBH5Q6P6C2 394 aaKnown RBP18.65■□□□□ 0.58
CLDND1-220ENST00000508902 ARMCX6Q7L4S7 300 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 SLFN11Q7Z7L1 901 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 METTL3Q86U44 580 aaKnown RBP18.65■□□□□ 0.58
CLDND1-220ENST00000508902 KDM1BQ8NB78 822 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 OR8K1Q8NGG5 319 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 FNIP1Q8TF40 1166 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 TCEAL3Q969E4 200 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 FAM129BQ96TA1 746 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 ITM2CQ9NQX7 267 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 TMEM51Q9NW97 253 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 SERGEFQ9UGK8 458 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 RAB23Q9ULC3 237 aa18.65■□□□□ 0.58
CLDND1-220ENST00000508902 PCDH15Q96QU1 1955 aa18.64■□□□□ 0.58
CLDND1-220ENST00000508902 CACNA1AO00555 2505 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 SMAD6O43541 496 aaKnown RBP18.64■□□□□ 0.57
CLDND1-220ENST00000508902 IGLV3-19P01714 112 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 TPM3P06753 285 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 MIPP30301 263 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 VASPP50552 380 aaPredicted RBP18.64■□□□□ 0.57
CLDND1-220ENST00000508902 GALCP54803 685 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 SF3A2Q15428 464 aaKnown RBP18.64■□□□□ 0.57
CLDND1-220ENST00000508902 TXNRD3NBQ6F5E7 133 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 LRRC31Q6UY01 552 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 SETD3Q86TU7 594 aaPredicted RBP18.64■□□□□ 0.57
CLDND1-220ENST00000508902 DRC7Q8IY82 874 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 TC2NQ8N9U0 490 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 VOPP1Q96AW1 172 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 SIPA1Q96FS4 1042 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 LOXL4Q96JB6 756 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 KCTD15Q96SI1 283 aaPredicted RBP18.64■□□□□ 0.57
CLDND1-220ENST00000508902 HINFPQ9BQA5 517 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 SNRNP25Q9BV90 132 aaKnown RBP18.64■□□□□ 0.57
CLDND1-220ENST00000508902 RSPH9Q9H1X1 276 aaPredicted RBP18.64■□□□□ 0.57
CLDND1-220ENST00000508902 TMEM74BQ9NUR3 256 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 TMEM248Q9NWD8 314 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 WSB2Q9NYS7 404 aaPredicted RBP18.64■□□□□ 0.57
CLDND1-220ENST00000508902 VPS28Q9UK41 221 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 GMEB2Q9UKD1 530 aa18.64■□□□□ 0.57
CLDND1-220ENST00000508902 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.64■□□□□ 0.57
CLDND1-220ENST00000508902 ADAMTS9Q9P2N4 1935 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 BCLAF3A2AJT9 711 aaKnown RBP18.63■□□□□ 0.57
CLDND1-220ENST00000508902 ATP9BO43861 1147 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 ZNF821O75541 412 aaPredicted RBP18.63■□□□□ 0.57
CLDND1-220ENST00000508902 MOCS3O95396 460 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 MYBL1P10243 752 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 SRCP12931 536 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 RHOQP17081 205 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 OR1E1P30953 314 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 L1CAMP32004 1257 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 ZNF75DP51815 510 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 ARF5P84085 180 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 ARL13BQ3SXY8 428 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 CCDC122Q5T0U0 273 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 LINGO4Q6UY18 593 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 CCDC117Q8IWD4 279 aaPredicted RBP18.63■□□□□ 0.57
CLDND1-220ENST00000508902 STK40Q8N2I9 435 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 SH2D3CQ8N5H7 860 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 DCAF4L2Q8NA75 395 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 TBC1D31Q96DN5 1066 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 SPACA7Q96KW9 195 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 KLC2Q9H0B6 622 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 MUC3BQ9H195 1237 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 SEMA4GQ9NTN9 838 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 SPTLC3Q9NUV7 552 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 PCSK1NQ9UHG2 260 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 HS3ST2Q9Y278 367 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 SLCO1B1Q9Y6L6 691 aa18.63■□□□□ 0.57
CLDND1-220ENST00000508902 ATXN2Q99700 1313 aaKnown RBP18.63■□□□□ 0.57
CLDND1-220ENST00000508902 DOCK9Q9BZ29 2069 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 SSU72P8A0A1W2PR75 194 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 ILVBLA1L0T0 632 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 PATE3B3GLJ2 98 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 C10orf142B7Z368 130 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 MPLP40238 635 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 GNA12Q03113 381 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 ELF2Q15723 593 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 SLC18A3Q16572 532 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 ACBD5Q5T8D3 534 aaPredicted RBP18.62■□□□□ 0.57
CLDND1-220ENST00000508902 RWDD4Q6NW29 188 aaKnown RBP18.62■□□□□ 0.57
CLDND1-220ENST00000508902 Q6ZVU0 165 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 PRCCQ92733 491 aaPredicted RBP18.62■□□□□ 0.57
CLDND1-220ENST00000508902 TRIM11Q96F44 468 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 TOE1Q96GM8 510 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms