RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 TPMTP51580 245 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 COPAP53621 1224 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 COG7P83436 770 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 ID3Q02535 119 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 INCA1Q0VD86 236 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 STARD3Q14849 445 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 LRRC14Q15048 493 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 E2F5Q15329 346 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 CPSF6Q16630 551 aaKnown RBP eCLIP9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 GEN1Q17RS7 908 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 C19orf48Q6RUI8 117 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 IL27RAQ6UWB1 636 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 KIAA1324Q6UXG2 1013 aaKnown RBP9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 SCARA5Q6ZMJ2 495 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 CCDC186Q7Z3E2 898 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 SCD5Q86SK9 330 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 PDZD3Q86UT5 571 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 TMPRSS6Q8IU80 811 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 ZDHHC13Q8IUH4 622 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 ERLEC1Q96DZ1 483 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 CYFIP2Q96F07 1278 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 SIPA1Q96FS4 1042 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 PIWIL1Q96J94 861 aaKnown RBP9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 NUP58Q9BVL2 599 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 OSBPL1AQ9BXW6 950 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 PCED1AQ9H1Q7 454 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 GAREM1Q9H706 876 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 IL21RQ9HBE5 538 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 SLC39A2Q9NP94 309 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 TM7SF3Q9NS93 570 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 ELOVL2Q9NXB9 296 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 PLK2Q9NYY3 685 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 CLIC5Q9NZA1 410 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 HMGXB4Q9UGU5 601 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 NUDT5Q9UKK9 219 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 ARID1BQ8NFD5 2236 aaPredicted RBP9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 TMEM131Q92545 1883 aa9.02□□□□□ -0.97
COL4A3BP-206ENST00000508809 POLR2DO15514 142 aaKnown RBP9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 TIMM44O43615 452 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 STX6O43752 255 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 KLRC4O43908 158 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 CILPO75339 1184 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 CER1O95813 267 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 MATKP42679 507 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 DLG4P78352 724 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 CUL4BQ13620 913 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 COL28A1Q2UY09 1125 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 HLA-BQ31612 363 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 C10orf120Q5SQS8 335 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 C1orf220Q5T0J3 134 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 DCAF12L1Q5VU92 463 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 TMEM215Q68D42 235 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 TADA2BQ86TJ2 420 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 FAM217AQ8IXS0 508 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 CPXM2Q8N436 756 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 ZCCHC9Q8N567 271 aaKnown RBP9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 MDM1Q8TC05 714 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 SETD7Q8WTS6 366 aaKnown RBP9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 UCMAQ8WVF2 138 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 TWNKQ96RR1 684 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 CDK5RAP1Q96SZ6 601 aaKnown RBP9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 CDC6Q99741 560 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 DUSP16Q9BY84 665 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 BACH2Q9BYV9 841 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 SLC2A11Q9BYW1 496 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 UBXN6Q9BZV1 441 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 DCLK3Q9C098 648 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 BLZF1Q9H2G9 400 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 KCTD10Q9H3F6 313 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 CYP3A43Q9HB55 503 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 FAM49BQ9NUQ9 324 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 CLEC4EQ9ULY5 219 aa9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 FLNBO75369 2602 aaKnown RBP9.01□□□□□ -0.97
COL4A3BP-206ENST00000508809 KALRNO60229 2985 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 MEI4A8MW99 385 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 PDXKO00764 312 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 MAPK13O15264 365 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 FLRT2O43155 660 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 SYNCRIPO60506 623 aaKnown RBP9□□□□□ -0.97
COL4A3BP-206ENST00000508809 YEATS4O95619 227 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 TGFB1P01137 390 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 ATXN1LP0C7T5 689 aaKnown RBP9□□□□□ -0.97
COL4A3BP-206ENST00000508809 ADORA2BP29275 332 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 STK4Q13043 487 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 ZNF234Q14588 700 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 EIF4HQ15056 248 aaKnown RBP9□□□□□ -0.97
COL4A3BP-206ENST00000508809 SPOPLQ6IQ16 392 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 KIAA0895Q8NCT3 520 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 PRCCQ92733 491 aaPredicted RBP9□□□□□ -0.97
COL4A3BP-206ENST00000508809 ZNF396Q96N95 335 aaPredicted RBP9□□□□□ -0.97
COL4A3BP-206ENST00000508809 NT5C1AQ9BXI3 368 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 MIR1-1HGQ9H1L0 117 aa9□□□□□ -0.97
COL4A3BP-206ENST00000508809 APOBEC3GQ9HC16 384 aaKnown RBP9□□□□□ -0.97
COL4A3BP-206ENST00000508809 EIF2B4Q9UI10 523 aaKnown RBP9□□□□□ -0.97
COL4A3BP-206ENST00000508809 AGO1Q9UL18 857 aaKnown RBP9□□□□□ -0.97
COL4A3BP-206ENST00000508809 PTPRQQ9UMZ3 2332 aa8.99□□□□□ -0.97
COL4A3BP-206ENST00000508809 A0A1B0GVT2 93 aa8.99□□□□□ -0.97
COL4A3BP-206ENST00000508809 TMPRSS2O15393 492 aa8.99□□□□□ -0.97
COL4A3BP-206ENST00000508809 HLA-DRAP01903 254 aa8.99□□□□□ -0.97
COL4A3BP-206ENST00000508809 RALAP11233 206 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms