RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 NBL1P41271 181 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 SLC1A1P43005 524 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 NOP2P46087 812 aaKnown RBP15.38■□□□□ 0.05
RNF4-210ENST00000508235 FNTBP49356 437 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 HADHBP55084 474 aaKnown RBP15.38■□□□□ 0.05
RNF4-210ENST00000508235 YBEYP58557 167 aaPredicted RBP15.38■□□□□ 0.05
RNF4-210ENST00000508235 SLC25A11Q02978 314 aaKnown RBP15.38■□□□□ 0.05
RNF4-210ENST00000508235 BYSLQ13895 437 aaKnown RBP15.38■□□□□ 0.05
RNF4-210ENST00000508235 MESDQ14696 234 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 DPYSL2Q16555 572 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 PPP6R3Q5H9R7 873 aaPredicted RBP15.38■□□□□ 0.05
RNF4-210ENST00000508235 DAB2IPQ5VWQ8 1189 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 RETSATQ6NUM9 610 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 RAD9BQ6WBX8 426 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 CYP4V2Q6ZWL3 525 aaPredicted RBP15.38■□□□□ 0.05
RNF4-210ENST00000508235 PGBD3Q8N328 593 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 OR52K2Q8NGK3 314 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 HSPH1Q92598 858 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 MAGEB5Q9BZ81 275 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 ATP13A1Q9HD20 1204 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.38■□□□□ 0.05
RNF4-210ENST00000508235 POLR3BQ9NW08 1133 aaPredicted RBP15.38■□□□□ 0.05
RNF4-210ENST00000508235 RAPGEFL1Q9UHV5 662 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 DNAI1Q9UI46 699 aa15.38■□□□□ 0.05
RNF4-210ENST00000508235 TARSL2A2RTX5 802 aaKnown RBP15.37■□□□□ 0.05
RNF4-210ENST00000508235 TMEM110-MUSTN1A8MSY1 372 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 RAMP2O60895 175 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 LILRB5O75023 590 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 RARAP10276 462 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 IL1R2P27930 398 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 MRE11P49959 708 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 GEMIN4P57678 1058 aaKnown RBP15.37■□□□□ 0.05
RNF4-210ENST00000508235 NHLH1Q02575 133 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 CAMK2GQ13555 558 aaPredicted RBP15.37■□□□□ 0.05
RNF4-210ENST00000508235 KRT81Q14533 505 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 POLD3Q15054 466 aaPredicted RBP15.37■□□□□ 0.05
RNF4-210ENST00000508235 CA9Q16790 459 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 SMTNL2Q2TAL5 461 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 USP39Q53GS9 565 aaKnown RBP15.37■□□□□ 0.05
RNF4-210ENST00000508235 IL31Q6EBC2 164 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 KIAA1211LQ6NV74 962 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 RFX8Q6ZV50 586 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 KIAA1328Q86T90 577 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 TMEM139Q8IV31 216 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 MAP7D3Q8IWC1 876 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 MDGA1Q8NFP4 955 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 HMGB4Q8WW32 186 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 MRGPRX3Q96LB0 322 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 KCTD15Q96SI1 283 aaPredicted RBP15.37■□□□□ 0.05
RNF4-210ENST00000508235 SPON2Q9BUD6 331 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 RCOR3Q9P2K3 495 aaPredicted RBP15.37■□□□□ 0.05
RNF4-210ENST00000508235 RAD54BQ9Y620 910 aa15.37■□□□□ 0.05
RNF4-210ENST00000508235 A0A0D9SEW6 157 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 EDDM13A0A1B0GTR0 161 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 BTNL10A8MVZ5 291 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 CBX4O00257 560 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 GABRG2P18507 467 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 CTSOP43234 321 aaPredicted RBP15.36■□□□□ 0.05
RNF4-210ENST00000508235 CLCN6P51797 869 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 VAV2P52735 878 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 NDST2P52849 883 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 SLC20A2Q08357 652 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 DMWDQ09019 674 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 PDK2Q15119 407 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 HNRNPA1L2Q32P51 320 aaKnown RBP15.36■□□□□ 0.05
RNF4-210ENST00000508235 PARP15Q460N3 678 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 KCNT1Q5JUK3 1230 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 POLNQ7Z5Q5 900 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 C11orf74Q86VG3 221 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 UMODL1-AS1Q8N2C9 162 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 OR2T3Q8NH03 318 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 GAB3Q8WWW8 586 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 ARHGEF2Q92974 986 aaKnown RBP15.36■□□□□ 0.05
RNF4-210ENST00000508235 MYO19Q96H55 970 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 RPL10LQ96L21 214 aaKnown RBP15.36■□□□□ 0.05
RNF4-210ENST00000508235 PSMB7Q99436 277 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 CD248Q9HCU0 757 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 VPS51Q9UID3 782 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 HS3ST2Q9Y278 367 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 EML5Q05BV3 1969 aa15.36■□□□□ 0.05
RNF4-210ENST00000508235 NYNRINQ9P2P1 1898 aaKnown RBP15.35■□□□□ 0.05
RNF4-210ENST00000508235 ZSCAN5CA6NGD5 496 aaPredicted RBP15.35■□□□□ 0.05
RNF4-210ENST00000508235 ATP9BO43861 1147 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 RNASEH1O60930 286 aaKnown RBP15.35■□□□□ 0.05
RNF4-210ENST00000508235 ZNF217O75362 1048 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 RPP40O75818 363 aaKnown RBP15.35■□□□□ 0.05
RNF4-210ENST00000508235 HLA-EP13747 358 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 TCF4P15884 667 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 GOT1P17174 413 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 ERCC2P18074 760 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 PXNP49023 591 aaPredicted RBP15.35■□□□□ 0.05
RNF4-210ENST00000508235 CDH6P55285 790 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 ZFYVE27Q5T4F4 411 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 LRRC38Q5VT99 294 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 METTL3Q86U44 580 aaKnown RBP15.35■□□□□ 0.05
RNF4-210ENST00000508235 ZNF354CQ86Y25 554 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 LZTR1Q8N653 840 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 ATP11CQ8NB49 1132 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 KCTD6Q8NC69 237 aa15.35■□□□□ 0.05
RNF4-210ENST00000508235 OR7D4Q8NG98 312 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms