RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 Q9H521 79 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 GALNT8Q9NY28 637 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 HACD1B0YJ81 288 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 TK2O00142 265 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 KCNK1O00180 336 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 MATN2O00339 956 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 TOMM70O94826 608 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 C2P06681 752 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 CCDC130P13994 396 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 ADORA2BP29275 332 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 PITX1P78337 314 aaPredicted RBP13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 HSP90AA5PQ58FG0 334 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 SPANXN3Q5MJ09 141 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 MICALL2Q8IY33 904 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 AHI1Q8N157 1196 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 URGCPQ8TCY9 931 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 SPATA33Q96N06 139 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 SERPINI1Q99574 410 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 NAT9Q9BTE0 207 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 PRDM12Q9H4Q4 367 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 ZNF696Q9H7X3 374 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 NMRAL1Q9HBL8 299 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 RNF19AQ9NV58 838 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 GTF2IRD1Q9UHL9 959 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 SYNJ2BP-COX16A0A087WUM0 186 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 GOLGA8TH3BQL2 631 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 GRID2O43424 1007 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 TMCC1O94876 653 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 TNFAIP8O95379 198 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 TGFB3P10600 412 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 TCN1P20061 433 aaPredicted RBP13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 SPRP35270 261 aaPredicted RBP13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 ARL4AP40617 200 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 SH3BGRP55822 239 aaPredicted RBP13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 TNFAIP2Q03169 654 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 CYLC2Q14093 348 aaPredicted RBP13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 MYBPC3Q14896 1274 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 PDK1Q15118 436 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 PLPPR4Q7Z2D5 763 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 CNDP1Q96KN2 507 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 ILKAPQ9H0C8 392 aaPredicted RBP13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 COX16Q9P0S2 106 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 ADAM28Q9UKQ2 775 aa13.7□□□□□ -0.22
SNCAIP-209ENST00000508017 KPNA7A9QM74 516 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 TRPA1O75762 1119 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 PIGNO95427 931 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 VTNP04004 478 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 PGK2P07205 417 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 HPCAP84074 193 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 IFRD2Q12894 506 aaPredicted RBP13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 APOFQ13790 326 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 PPP2R5DQ14738 602 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 CELF3Q5SZQ8 465 aaKnown RBP13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 SLC26A9Q7LBE3 791 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 AMIGO2Q86SJ2 522 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 MFSD3Q96ES6 412 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 WDR41Q9HAD4 459 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 OXSMQ9NWU1 459 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 ZDHHC2Q9UIJ5 367 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 FZD10Q9ULW2 581 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 WDR90Q96KV7 1748 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 ZCWPW2A0A1B0GU75 182 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 PRSS51A0A1B0GVH4 220 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 SOCS7O14512 581 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 IRF6O14896 467 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 HDAC3O15379 428 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 C22orf31O95567 290 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 SBK3P0C264 359 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 SETSIPP0DME0 302 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 SAT1P21673 171 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 GRIA4P48058 902 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 GLRBP48167 497 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 ARL13AQ5H913 290 aaPredicted RBP13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 SEL1L3Q68CR1 1132 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 NXNQ6DKJ4 435 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 PID1Q7Z2X4 250 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 ADCY4Q8NFM4 1077 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 OR6B3Q8NGW1 331 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 RP9Q8TA86 221 aaKnown RBP13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 ZFRQ96KR1 1074 aaKnown RBP13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 NPAS2Q99743 824 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 MRPL1Q9BYD6 325 aaKnown RBP13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 ZNF385DQ9H6B1 395 aa13.69□□□□□ -0.22
SNCAIP-209ENST00000508017 CCDC78A2IDD5 438 aa13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 H3BSA7 217 aa13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 RNASEH2AO75792 299 aaKnown RBP13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 PDGFRBP09619 1106 aa13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 FAM58BPP0C7Q3 252 aa13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 FAM200BP0CF97 657 aa13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 PTPN1P18031 435 aaKnown RBP13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 SLC5A2P31639 672 aa13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 PPARGP37231 505 aaPredicted RBP13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 GLUD2P49448 558 aa13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 GMPSP49915 693 aaPredicted RBP13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 TMEM259Q4ZIN3 620 aa13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 CERCAMQ5T4B2 595 aa13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 ZFP1Q6P2D0 407 aa13.68□□□□□ -0.22
SNCAIP-209ENST00000508017 LBX2Q6XYB7 198 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms