RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 C5orf34Q96MH7 638 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.79□□□□□ -1.8
LSM6-205ENST00000507449 ZDHHC7Q9NXF8 308 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 ARL15Q9NXU5 204 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 ZNHIT2Q9UHR6 403 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 ARHGAP26Q9UNA1 814 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 COL11A2P13942 1736 aaPredicted RBP3.78□□□□□ -1.8
LSM6-205ENST00000507449 CCDC196A0A1B0GTZ2 297 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 TCRBV7S3A2A0A539 114 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 KCNJ18B7U540 433 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 INPPL1O15357 1258 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 ANP32CO43423 234 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 IFIT1P09914 478 aaKnown RBP3.78□□□□□ -1.8
LSM6-205ENST00000507449 LMO1P25800 156 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 TACR3P29371 465 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 CASP6P55212 293 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 CFHR1Q03591 330 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 TBL3Q12788 808 aaKnown RBP3.78□□□□□ -1.8
LSM6-205ENST00000507449 IL13RA2Q14627 380 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 MAPRE1Q15691 268 aaKnown RBP3.78□□□□□ -1.8
LSM6-205ENST00000507449 FBXO43Q4G163 708 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 GJB7Q6PEY0 223 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 TBC1D1Q86TI0 1168 aaPredicted RBP3.78□□□□□ -1.8
LSM6-205ENST00000507449 TCP11L2Q8N4U5 519 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 TMEM217Q8N7C4 229 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 OSR1Q8TAX0 266 aaPredicted RBP3.78□□□□□ -1.8
LSM6-205ENST00000507449 HASPINQ8TF76 798 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 RUFY2Q8WXA3 655 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 APOPT1Q96IL0 206 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 USP44Q9H0E7 712 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 UNC45AQ9H3U1 944 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 JMJD4Q9H9V9 463 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 PREBQ9HCU5 417 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 SEMA4BQ9NPR2 832 aaPredicted RBP3.78□□□□□ -1.8
LSM6-205ENST00000507449 PDGFCQ9NRA1 345 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 SLC25A10Q9UBX3 287 aaPredicted RBP3.78□□□□□ -1.8
LSM6-205ENST00000507449 SLC25A13Q9UJS0 675 aa3.78□□□□□ -1.8
LSM6-205ENST00000507449 WDR33Q9C0J8 1336 aaKnown RBP3.77□□□□□ -1.81
LSM6-205ENST00000507449 CXorf65A6NEN9 183 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 C2CD4BA6NLJ0 364 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 SPTLC2O15270 562 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 TULP3O75386 442 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 F9P00740 461 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 BMP5P22003 454 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 PRKCHP24723 683 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 GSTM2P28161 218 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 GJC1P36383 396 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 PTPN9P43378 593 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 RXRGP48443 463 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 NHLH1Q02575 133 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 GPR68Q15743 365 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 NFIL3Q16649 462 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 CEP78Q5JTW2 689 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 GPATCH4Q5T3I0 446 aaKnown RBP3.77□□□□□ -1.81
LSM6-205ENST00000507449 MEX3CQ5U5Q3 659 aaKnown RBP3.77□□□□□ -1.81
LSM6-205ENST00000507449 RD3Q7Z3Z2 195 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 MON1AQ86VX9 555 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 PRIMA1Q86XR5 153 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 SETD9Q8NE22 299 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 RFWD2Q8NHY2 731 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 RFFLQ8WZ73 363 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 EYA3Q99504 573 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 RIOX1Q9H6W3 641 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 MOV10Q9HCE1 1003 aaKnown RBP3.77□□□□□ -1.81
LSM6-205ENST00000507449 ERVK-5Q9HDB9 667 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 SMC4Q9NTJ3 1288 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 KLHL13Q9P2N7 655 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 MAFFQ9ULX9 164 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 NAALADL1Q9UQQ1 740 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 CNPY2Q9Y2B0 182 aa3.77□□□□□ -1.81
LSM6-205ENST00000507449 CYP2D7A0A087X1C5 515 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 PER2O15055 1255 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 NUDT3O95989 172 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 PRKCGP05129 697 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 URODP06132 367 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 CAPN3P20807 821 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 KRT9P35527 623 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 ELLP55199 621 aaPredicted RBP3.76□□□□□ -1.81
LSM6-205ENST00000507449 RPP30P78346 268 aaKnown RBP3.76□□□□□ -1.81
LSM6-205ENST00000507449 LMOD3Q0VAK6 560 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 NAA25Q14CX7 972 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 TSTQ16762 297 aaKnown RBP3.76□□□□□ -1.81
LSM6-205ENST00000507449 ZNF766Q5HY98 468 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 ZNF667Q5HYK9 610 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 EARS2Q5JPH6 523 aaKnown RBP3.76□□□□□ -1.81
LSM6-205ENST00000507449 STRIP1Q5VSL9 837 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 PAPD7Q5XG87 772 aaKnown RBP3.76□□□□□ -1.81
LSM6-205ENST00000507449 SLC22A25Q6T423 547 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 RSRC2Q7L4I2 434 aaKnown RBP3.76□□□□□ -1.81
LSM6-205ENST00000507449 NEK8Q86SG6 692 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 ADGRG6Q86SQ4 1221 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 ADGRG3Q86Y34 549 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 KLBQ86Z14 1044 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 UEVLDQ8IX04 471 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 C16orf71Q8IYS4 520 aaPredicted RBP3.76□□□□□ -1.81
LSM6-205ENST00000507449 SCAIQ8N9R8 606 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 RAB40AQ8WXH6 277 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 NCSTNQ92542 709 aa3.76□□□□□ -1.81
LSM6-205ENST00000507449 SH2D3AQ9BRG2 576 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms