RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 PEAR1Q5VY43 1037 aaPredicted RBP8.3□□□□□ -1.08
SCN1A-207ENST00000507401 ALS2CLQ60I27 953 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 IL31Q6EBC2 164 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 DENND1BQ6P3S1 775 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 SLC23A3Q6PIS1 610 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 CYP2U1Q7Z449 544 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 RABEPKQ7Z6M1 372 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 TMTC1Q8IUR5 882 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 SYT12Q8IV01 421 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 CEP76Q8TAP6 659 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 WFIKKN2Q8TEU8 576 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 COG1Q8WTW3 980 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 SHC3Q92529 594 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 BHMTQ93088 406 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 SLC39A13Q96H72 371 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 ZNF419Q96HQ0 510 aaPredicted RBP8.3□□□□□ -1.08
SCN1A-207ENST00000507401 MRGPRX1Q96LB2 322 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 SERPINB11Q96P15 392 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 NAPGQ99747 312 aaPredicted RBP8.3□□□□□ -1.08
SCN1A-207ENST00000507401 MIS12Q9H081 205 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 NDST4Q9H3R1 872 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 ANKZF1Q9H8Y5 726 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 POPDC2Q9HBU9 364 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 ITM2CQ9NQX7 267 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 ASNSD1Q9NWL6 643 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 CACNA2D2Q9NY47 1150 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 PILRBQ9UKJ0 227 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 CLEC4EQ9ULY5 219 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 PLA2G4CQ9UP65 541 aa8.3□□□□□ -1.08
SCN1A-207ENST00000507401 ITIH6Q6UXX5 1313 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 IGHV1OR15-9A0A0B4J2B8 117 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 MED19A0JLT2 244 aaPredicted RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 TTLL8A6PVC2 850 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 AKR1B15C9JRZ8 316 aaPredicted RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 PIK3R2O00459 728 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 CAPN9O14815 690 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 PAPSS1O43252 624 aaPredicted RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 MSI1O43347 362 aaKnown RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 THAP12O43422 761 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 SYNCRIPO60506 623 aaKnown RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 CALCAP01258 141 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 IGLV3-19P01714 112 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 ATP5BP06576 529 aaKnown RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 SLC2A3P11169 496 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 EZRP15311 586 aaKnown RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 EEF1GP26641 437 aaKnown RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 HLA-FP30511 346 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 IL12RB1P42701 662 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 WASP42768 502 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 PTGER3P43115 390 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 GYS2P54840 703 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 RPL6Q02878 288 aaKnown RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 LMAN2Q12907 356 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 EIF4EBP2Q13542 120 aaPredicted RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 CCDC6Q16204 474 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 ARHGAP44Q17R89 818 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 FAM133BQ5BKY9 247 aaKnown RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 EFHC1Q5JVL4 640 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 WLSQ5T9L3 541 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 SYPL2Q5VXT5 272 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 TMEM215Q68D42 235 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 KIAA1211LQ6NV74 962 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 DPY19L2P1Q6NXN4 242 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 ADIPOR2Q86V24 386 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 TMEM139Q8IV31 216 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 TMEFF1Q8IYR6 380 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 AHI1Q8N157 1196 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 WDTC1Q8N5D0 677 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 FRMD1Q8N878 549 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 KDM1BQ8NB78 822 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 FIBINQ8TAL6 211 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 ENOX1Q8TC92 643 aaKnown RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 DQX1Q8TE96 717 aaKnown RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 CLEC4CQ8WTT0 213 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 PIGKQ92643 395 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 FCRL2Q96LA5 508 aaPredicted RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 FAM210AQ96ND0 272 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 ANKRD27Q96NW4 1050 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 NOX5Q96PH1 765 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 TUBGCP2Q9BSJ2 902 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 LSM14BQ9BX40 385 aaKnown RBP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 PRDM16Q9HAZ2 1276 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 SIX2Q9NPC8 291 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 HOMER3Q9NSC5 361 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 RXFP3Q9NSD7 469 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.29□□□□□ -1.08
SCN1A-207ENST00000507401 SLC12A6Q9UHW9 1150 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 CYTH4Q9UIA0 394 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 DNAJC12Q9UKB3 198 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 NAALADL1Q9UQQ1 740 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 NFE2L3Q9Y4A8 694 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 FAM169AQ9Y6X4 670 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 CEP192Q8TEP8 1941 aa8.29□□□□□ -1.08
SCN1A-207ENST00000507401 LAMA1P25391 3075 aa8.28□□□□□ -1.08
SCN1A-207ENST00000507401 LNP1A1A4G5 178 aa8.28□□□□□ -1.08
SCN1A-207ENST00000507401 TYW5A2RUC4 315 aaKnown RBP8.28□□□□□ -1.08
SCN1A-207ENST00000507401 GOLGA6CA6NDK9 693 aa8.28□□□□□ -1.08
SCN1A-207ENST00000507401 E5RJQ4 531 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms