RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 TP53INP2Q8IXH6 220 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 SYCP3Q8IZU3 236 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 ZNF276Q8N554 614 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 APOBEC4Q8WW27 367 aaKnown RBP7.48□□□□□ -1.21
VCAN-207ENST00000507162 NAT6Q93015 286 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 MYO19Q96H55 970 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 TMEM74Q96NL1 305 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 FIZ1Q96SL8 496 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 MARCH2Q9P0N8 246 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 STIM2Q9P246 746 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 SLCO3A1Q9UIG8 710 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 GGT7Q9UJ14 662 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 STRIP2Q9ULQ0 834 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 PADI4Q9UM07 663 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 NOL7Q9UMY1 257 aaKnown RBP7.48□□□□□ -1.21
VCAN-207ENST00000507162 CEP83Q9Y592 693 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 CSNK1G3Q9Y6M4 447 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 EDDM13A0A1B0GTR0 161 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 ZNF891A8MT65 544 aaPredicted RBP7.47□□□□□ -1.21
VCAN-207ENST00000507162 C9orf172C9J069 976 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 H3BM21 787 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 K7EM74 188 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 HNRNPRO43390 633 aaKnown RBP7.47□□□□□ -1.21
VCAN-207ENST00000507162 PLRG1O43660 514 aaKnown RBP7.47□□□□□ -1.21
VCAN-207ENST00000507162 JAK2O60674 1132 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 JUNDP17535 347 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 MZF1P28698 734 aaPredicted RBP7.47□□□□□ -1.21
VCAN-207ENST00000507162 ADORA2BP29275 332 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 DRD3P35462 400 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 DDIT3P35638 169 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 CTSOP43234 321 aaPredicted RBP7.47□□□□□ -1.21
VCAN-207ENST00000507162 ZNF131P52739 623 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 ADKP55263 362 aaKnown RBP7.47□□□□□ -1.21
VCAN-207ENST00000507162 TMEM164Q5U3C3 297 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 ASB18Q6ZVZ8 466 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 ZNF720Q7Z2F6 126 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 TRAPPC11Q7Z392 1133 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 TMPRSS9Q7Z410 1059 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 PTAR1Q7Z6K3 402 aaPredicted RBP7.47□□□□□ -1.21
VCAN-207ENST00000507162 SLC35F3Q8IY50 421 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 FUKQ8N0W3 1084 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 SLC22A18ASQ8N1D0 253 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 SDR16C5Q8N3Y7 309 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.47□□□□□ -1.21
VCAN-207ENST00000507162 TMEM145Q8NBT3 493 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 WFDC5Q8TCV5 224 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 SLC2A14Q8TDB8 520 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 PTPRN2Q92932 1015 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 NKD1Q969G9 470 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 TTC17Q96AE7 1141 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 IFT43Q96FT9 208 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 TNIP3Q96KP6 325 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 ACCSQ96QU6 501 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 CDK5RAP1Q96SZ6 601 aaKnown RBP7.47□□□□□ -1.21
VCAN-207ENST00000507162 UNKQ9C0B0 810 aaKnown RBP7.47□□□□□ -1.21
VCAN-207ENST00000507162 TBC1D7Q9P0N9 293 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 MAP10Q9P2G4 905 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 EXOC7Q9UPT5 735 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 ERVW-1Q9UQF0 538 aa7.47□□□□□ -1.21
VCAN-207ENST00000507162 A0A1W2PQU0 124 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 D6RAR5 112 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 STMND1H3BQB6 276 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 DUX1O43812 170 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 CSF2P04141 144 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 ASLP04424 464 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 RPLP0P05388 317 aaKnown RBP7.46□□□□□ -1.22
VCAN-207ENST00000507162 ANXA6P08133 673 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 DLATP10515 647 aaKnown RBP7.46□□□□□ -1.22
VCAN-207ENST00000507162 VAV1P15498 845 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 TNNI1P19237 187 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 CD82P27701 267 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 NUMBP49757 651 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 SGSHP51688 502 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 CNTN1Q12860 1018 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 MRPL49Q13405 166 aaKnown RBP7.46□□□□□ -1.22
VCAN-207ENST00000507162 TRPC3Q13507 836 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 FZD2Q14332 565 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 MCM6Q14566 821 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 HYIQ5T013 277 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 RNF219Q5W0B1 726 aaPredicted RBP7.46□□□□□ -1.22
VCAN-207ENST00000507162 ESRP1Q6NXG1 681 aaKnown RBP7.46□□□□□ -1.22
VCAN-207ENST00000507162 C16orf46Q6P387 395 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 RFWD3Q6PCD5 774 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 SCARA5Q6ZMJ2 495 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 SLC34A3Q8N130 599 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 Q8N9G6 341 aaPredicted RBP7.46□□□□□ -1.22
VCAN-207ENST00000507162 RPL10LQ96L21 214 aaKnown RBP7.46□□□□□ -1.22
VCAN-207ENST00000507162 MRGPRX3Q96LB0 322 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 CMKLR1Q99788 373 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 CBWD1Q9BRT8 395 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 BOCQ9BWV1 1114 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 CPEB1Q9BZB8 566 aaKnown RBP7.46□□□□□ -1.22
VCAN-207ENST00000507162 SMYD3Q9H7B4 428 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 FAM49BQ9NUQ9 324 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 SIRPGQ9P1W8 387 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 KLF15Q9UIH9 416 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 KIF3AQ9Y496 699 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 PCDHA5Q9Y5H7 936 aa7.46□□□□□ -1.22
VCAN-207ENST00000507162 DIDO1Q9BTC0 2240 aaKnown RBP7.46□□□□□ -1.22
VCAN-207ENST00000507162 GOLGA6L7A0A1B0GV03 622 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms