RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 IGHV4-34P06331 123 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 FTH1P19P0C7X4 201 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 CTSOP43234 321 aaPredicted RBP14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 PSMD8P48556 350 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 SULT1E1P49888 294 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 KCNMA1Q12791 1236 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 OVGP1Q12889 678 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 C6orf118Q5T5N4 469 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 FAM102AQ5T9C2 384 aaPredicted RBP14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 NCEH1Q6PIU2 408 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 ZNF783Q6ZMS7 281 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 TRIM72Q6ZMU5 477 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 PRPF39Q86UA1 669 aaKnown RBP14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 STK40Q8N2I9 435 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 GATA6Q92908 595 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 FAM131CQ96AQ9 280 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 RPL10LQ96L21 214 aaKnown RBP14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 HAPLN3Q96S86 360 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 TKTL2Q9H0I9 626 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 DMTF1Q9Y222 760 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 HS3ST2Q9Y278 367 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 FNDC3AQ9Y2H6 1198 aaKnown RBP14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 FHOD1Q9Y613 1164 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 KNL1Q8NG31 2342 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 FAM47DPA6NHR8 397 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 C1QTNF9BB2RNN3 333 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 F8VZ95 297 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 MCF2LO15068 1137 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 RHOCP08134 193 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 C1QTNF9P0C862 333 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 CDK4P11802 303 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 CTSKP43235 329 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 ADPRHP54922 357 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 BNC1Q01954 994 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 ACCSLQ4AC99 568 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 DPY19L2P1Q6NXN4 242 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 DCAF4L2Q8NA75 395 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 OR14C36Q8NHC7 312 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 RHBDD1Q8TEB9 315 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 FRS2Q8WU20 508 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 ALG14Q96F25 216 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 TMEM121BQ9BXQ6 578 aaPredicted RBP14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 SIK2Q9H0K1 926 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 MUC3BQ9H195 1237 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 MTG2Q9H4K7 406 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 SAMSN1Q9NSI8 373 aaKnown RBP14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 PIGVQ9NUD9 493 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 AJAP1Q9UKB5 411 aaPredicted RBP14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 SNX11Q9Y5W9 270 aa14.82□□□□□ -0.04
HMGCS1-203ENST00000507004 DRGXA6NNA5 263 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 C10orf142B7Z368 130 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 RNGTTO60942 597 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 ZNF18P17022 549 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 CD38P28907 300 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 ETFBP38117 255 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 ARRB1P49407 418 aaPredicted RBP14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 STK19P49842 368 aaPredicted RBP14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 RNASE9P60153 205 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 SLC20A2Q08357 652 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 DLG2Q15700 870 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 ARL13BQ3SXY8 428 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 RETSATQ6NUM9 610 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 NEK5Q6P3R8 708 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 IQCHQ86VS3 1027 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 XYLT1Q86Y38 959 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 SH2D3CQ8N5H7 860 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 BAHD1Q8TBE0 780 aaPredicted RBP14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 EPS8L1Q8TE68 723 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 ORAI3Q9BRQ5 295 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 IL21RQ9HBE5 538 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 GDF3Q9NR23 364 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 AASDHPPTQ9NRN7 309 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 OR51B4Q9Y5P0 310 aa14.81□□□□□ -0.04
HMGCS1-203ENST00000507004 IGLV3-10A0A075B6K4 115 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 TBC1D3DA0A087WVF3 549 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 TBC1D3IA0A087WXS9 549 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 TBC1D3EA0A087X179 549 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 TBC1D3KA0A087X1G2 549 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 A0A1B0GTQ1 180 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 TBC1D3FA6NER0 549 aaPredicted RBP14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 TBC1D3LB9A6J9 549 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 TNFSF14O43557 240 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 LATO43561 262 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 PRNPP04156 253 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 TBC1D3HP0C7X1 549 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 STAT1P42224 750 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 RECQLP46063 649 aaPredicted RBP14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 NOMO3P69849 1222 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 FAM193AP78312 1265 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 CDR2Q01850 454 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 CENPCQ03188 943 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 CDKAL1Q5VV42 579 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 TBC1D3GQ6DHY5 549 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 TBC1D3CQ6IPX1 549 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 NAPEPLDQ6IQ20 393 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 SASS6Q6UVJ0 657 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 RBM43Q6ZSC3 357 aaKnown RBP14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 ZSCAN30Q86W11 494 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 TRIM69Q86WT6 500 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 CIR1Q86X95 450 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms