RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ILVBLA1L0T0 632 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 CREB3O43889 395 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 PRPSAP2O60256 369 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 BCKDHBP21953 392 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 GLDCP23378 1020 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 P2RY2P41231 377 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 ST8SIA6P61647 398 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 SULT2A1Q06520 285 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 PIGHQ14442 188 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 ACAP1Q15027 740 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 HNRNPA1L2Q32P51 320 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 MAP7D1Q3KQU3 841 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 ERMARDQ5T6L9 678 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 TXNRD3NBQ6F5E7 133 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 PRR23BQ6ZRT6 265 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 KBTBD6Q86V97 674 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 PGBD3Q8N328 593 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 FAM160A2Q8N612 972 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 DCAF4L2Q8NA75 395 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 EPAS1Q99814 870 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 DHX35Q9H5Z1 703 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 OSGEPQ9NPF4 335 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 UVRAGQ9P2Y5 699 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 DNAI1Q9UI46 699 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 VPS51Q9UID3 782 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 ZNF292O60281 2723 aa18.71■□□□□ 0.59
PDLIM7-216ENST00000506537 GFRA3O60609 400 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 SIN3BO75182 1162 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 VAV1P15498 845 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 EPHB2P29323 1055 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 ACVRL1P37023 503 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 MAPKAPK2P49137 400 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 SLC25A11Q02978 314 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 GNA12Q03113 381 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 SMTNL2Q2TAL5 461 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 USP39Q53GS9 565 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 KIAA1324Q6UXG2 1013 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 ZNF783Q6ZMS7 281 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 CEP68Q76N32 757 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 CACUL1Q86Y37 369 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 RTL3Q8N8U3 475 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 OR2T3Q8NH03 318 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 FRS2Q8WU20 508 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 PPP1R9BQ96SB3 815 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 RETREG1Q9H6L5 497 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 NOL6Q9H6R4 1146 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 PRDM16Q9HAZ2 1276 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 MBD1Q9UIS9 605 aaPredicted RBP18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 SPAG17Q6Q759 2223 aa18.7■□□□□ 0.58
PDLIM7-216ENST00000506537 SOWAHDA6NJG2 315 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 MYO1FO00160 1098 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 ZMPSTE24O75844 475 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 LCA5LO95447 670 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 MT-CO1P00395 513 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 C7P10643 843 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 VASPP50552 380 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 TPI1P60174 286 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 PLK5Q496M5 336 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 KCNT1Q5JUK3 1230 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 C9orf64Q5T6V5 341 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 TMPRSS6Q8IU80 811 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 PSTKQ8IV42 348 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 NCAPGQ9BPX3 1015 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 C2orf49Q9BVC5 232 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 DUSP15Q9H1R2 295 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 SUN2Q9UH99 717 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 SLC25A13Q9UJS0 675 aa18.69■□□□□ 0.58
PDLIM7-216ENST00000506537 WASH4PA8MWX3 477 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 EIF3CLB5ME19 914 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 ATP9BO43861 1147 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 PROSCO94903 275 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 GOT1P17174 413 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 HTR7P34969 479 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 LINGO4Q6UY18 593 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 CCDC170Q8IYT3 715 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 SH2D3CQ8N5H7 860 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 SPC24Q8NBT2 197 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 SLC35G2Q8TBE7 412 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 PTPRN2Q92932 1015 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 ARHGEF2Q92974 986 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 SIPA1Q96FS4 1042 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 ZC3H10Q96K80 434 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 EIF3CQ99613 913 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 SPON2Q9BUD6 331 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 ACE2Q9BYF1 805 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 ZWILCHQ9H900 591 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 ATP13A1Q9HD20 1204 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 USP36Q9P275 1121 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 CYP8B1Q9UNU6 501 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 HS3ST2Q9Y278 367 aa18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 RIF1Q5UIP0 2472 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-216ENST00000506537 ABCA7Q8IZY2 2146 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 IGHV1OR15-9A0A0B4J2B8 117 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 EDDM13A0A1B0GTR0 161 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 K7ERQ8 282 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 EEF2KO00418 725 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 FGF10O15520 208 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 ZBTB24O43167 697 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 MTA2O94776 668 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 RARAP10276 462 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms