RNA–Protein interactions for RNA: ENST00000506360.5

SH3TC1-210, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 5,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-210ENST00000506360 PCDHGA4Q9Y5G9 962 aa16.49■□□□□ 0.23
SH3TC1-210ENST00000506360 ATP5BP06576 529 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 CAPN1P07384 714 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 SLC12A3P55017 1021 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 NAB1Q13506 487 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 GNA13Q14344 377 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 PALB2Q86YC2 1186 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 RNF148Q8N7C7 305 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 SENP8Q96LD8 212 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 GAD1Q99259 594 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 VAT1Q99536 393 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 RHBGQ9H310 441 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 ZSCAN5CA6NGD5 496 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 COX7A2P14406 83 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 RBM43Q6ZSC3 357 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 ACTRT2Q8TDY3 377 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 PROX1Q92786 737 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 SEMA4BQ9NPR2 832 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 MARCH2Q9P0N8 246 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 DDX3XO00571 662 aaKnown RBP eCLIP16.48■□□□□ 0.236e-7■■■□□ 17.6
SH3TC1-210ENST00000506360 ATP6V1G2O95670 118 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 S100A3P33764 101 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 PIK3CGP48736 1102 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 DPYSL3Q14195 570 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 TSNQ15631 228 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 DDX20Q9UHI6 824 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 TRIM17Q9Y577 477 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 EML1O00423 815 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 ACAP1Q15027 740 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 PPP1R16AQ96I34 528 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 FAM126AQ9BYI3 521 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 C6orf62Q9GZU0 229 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 ZFYVE1Q9HBF4 777 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 FAM50BQ9Y247 325 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 TRIM43BA6NCK2 446 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 SMIM22K7EJ46 135 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 APOC4-APOC2K7ER74 178 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 APOC2P02655 101 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 DGKAP23743 735 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 PURAQ00577 322 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 TRIQKQ629K1 86 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 WDR59Q6PJI9 974 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 SNX32Q86XE0 403 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 GRIN3AQ8TCU5 1115 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 SIKE1Q9BRV8 207 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 DDX4Q9NQI0 724 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 DIABLOQ9NR28 239 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 KCNQ5Q9NR82 932 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 ENOPH1Q9UHY7 261 aa16.48■□□□□ 0.23
SH3TC1-210ENST00000506360 A0A088AWK7 358 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 H2AFXP16104 143 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 ZNF10P21506 573 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 MAGEC3Q8TD91 643 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 STARD8Q92502 1023 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 MRPL17Q9NRX2 175 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 MYL12AP19105 171 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 INSCQ1MX18 579 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 ARMC4Q5T2S8 1044 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 IQSEC1Q6DN90 963 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 LPCAT2Q7L5N7 544 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 STK32CQ86UX6 486 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 STK40Q8N2I9 435 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 OR6Y1Q8NGX8 325 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 ASB2Q96Q27 587 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 TMEM237Q96Q45 408 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 RAD21L1Q9H4I0 556 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 ETNK2Q9NVF9 386 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 ZMYM2Q9UBW7 1377 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 H3BQF6 201 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 AGRPO00253 132 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 MYL12BO14950 172 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 OR6A2O95222 327 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 HOXC6P09630 235 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 SCNN1GP51170 649 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 SPIDRQ14159 915 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 PAGE2BQ5JRK9 111 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 CCDC149Q6ZUS6 474 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 DET1Q7L5Y6 550 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 ITFG1Q8TB96 612 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 MIEF2Q96C03 454 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 TBCDQ9BTW9 1192 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 INVSQ9Y283 1065 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 ANKDD1BA6NHY2 528 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 PHGDHO43175 533 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 CTSEP14091 401 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 CDK7P50613 346 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 ACSM2AQ08AH3 577 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 RRP1BQ14684 758 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 PARP6Q2NL67 630 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 PDZK1Q5T2W1 519 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 ACSM2BQ68CK6 577 aa16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 ZSCAN18Q8TBC5 510 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-210ENST00000506360 TBC1D3BA6NDS4 549 aa16.46■□□□□ 0.23
SH3TC1-210ENST00000506360 F8VP50 259 aa16.46■□□□□ 0.23
SH3TC1-210ENST00000506360 TPP1O14773 563 aa16.46■□□□□ 0.23
SH3TC1-210ENST00000506360 EPN2O95208 641 aa16.46■□□□□ 0.23
SH3TC1-210ENST00000506360 PTPN1P18031 435 aaKnown RBP16.46■□□□□ 0.23
SH3TC1-210ENST00000506360 TKTP29401 623 aaKnown RBP16.46■□□□□ 0.23
SH3TC1-210ENST00000506360 ATP5C1P36542 298 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms