RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 EXOC7Q9UPT5 735 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 DERAQ9Y315 318 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 NRCAMQ92823 1304 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 E5RJQ4 531 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 SOX1O00570 391 aaPredicted RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CEP104O60308 925 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 AOC2O75106 756 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 TPM1P09493 284 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CD58P19256 250 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 DNA2P51530 1060 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 LACTBP83111 547 aaPredicted RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 ZC3H12AQ5D1E8 599 aaKnown RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 KCNT1Q5JUK3 1230 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 FAM160B1Q5W0V3 765 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 MFSD5Q6N075 450 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CCDC137Q6PK04 289 aaKnown RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 MAMDC2Q7Z304 686 aaPredicted RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 PYROXD2Q8N2H3 581 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CCDC185Q8N715 623 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 EXD1Q8NHP7 514 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 FAM167AQ96KS9 214 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CFAP57Q96MR6 1250 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 SEZ6LQ9BYH1 1024 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 NRBP2Q9NSY0 501 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 SRPK3Q9UPE1 567 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 LAMA5O15230 3695 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 AREL1O15033 823 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 B3GALT2O43825 422 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 TBX18O95935 607 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 KDELR1P24390 212 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 LILRA4P59901 499 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 PRKCZQ05513 592 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 LPIN1Q14693 890 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 EFTUD2Q15029 972 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCLT1-207ENST00000506233 MAPK6Q16659 721 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 DUOXA2Q1HG44 320 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 POLNQ7Z5Q5 900 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 CCDC103Q8IW40 242 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 VWA5B2Q8N398 1253 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 ESX1Q8N693 406 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 OR10T2Q8NGX3 314 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 CCDC43Q96MW1 224 aaKnown RBP6.11□□□□□ -1.43
SCLT1-207ENST00000506233 FAM193BQ96PV7 902 aaPredicted RBP6.11□□□□□ -1.43
SCLT1-207ENST00000506233 SMOQ99835 787 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 MTCL1Q9Y4B5 1905 aaKnown RBP6.11□□□□□ -1.43
SCLT1-207ENST00000506233 CCDC66A2RUB6 948 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 PI4K2BG5E9Z4 385 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 CCDC188H7C350 402 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 KRIT1O00522 736 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 TYROBPO43914 113 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 PIAS1O75925 651 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 CD1EP15812 388 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 MAPK4P31152 587 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 KPNA1P52294 538 aaPredicted RBP6.11□□□□□ -1.43
SCLT1-207ENST00000506233 FAM189BP81408 668 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 TNFAIP2Q03169 654 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 SPEM2Q0P670 501 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 FAM209BQ5JX69 171 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 SAMD5Q5TGI4 173 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 MANEALQ5VSG8 457 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 LRIG3Q6UXM1 1119 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 SCARA5Q6ZMJ2 495 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 KREMEN2Q8NCW0 462 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 MNS1Q8NEH6 495 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 SORBS1Q9BX66 1292 aaKnown RBP6.11□□□□□ -1.43
SCLT1-207ENST00000506233 PRMT7Q9NVM4 692 aaPredicted RBP6.11□□□□□ -1.43
SCLT1-207ENST00000506233 B4GALT6Q9UBX8 382 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 AMFRQ9UKV5 643 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 FAM227AF5H4B4 570 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 ARVCFO00192 962 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 CACNG3O60359 315 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 UBXN7O94888 489 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 SLITRK5O94991 958 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 CCDC130P13994 396 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 MIPP30301 263 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 PDE6CP51160 858 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 SRSF2Q01130 221 aaKnown RBP6.11□□□□□ -1.43
SCLT1-207ENST00000506233 DR1Q01658 176 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 CKAP4Q07065 602 aaKnown RBP6.11□□□□□ -1.43
SCLT1-207ENST00000506233 DPYSQ14117 519 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 SLC29A2Q14542 456 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 CLLU1OSQ5K130 101 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 SYPL2Q5VXT5 272 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 FAM219BQ5XKK7 198 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 AFMIDQ63HM1 303 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 MTDHQ86UE4 582 aaKnown RBP6.11□□□□□ -1.43
SCLT1-207ENST00000506233 CHCHD4Q8N4Q1 142 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 NPWQ8N729 165 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 LSMEM1Q8N8F7 131 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 FAM13CQ8NE31 585 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 UBA3Q8TBC4 463 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 TCP11Q8WWU5 503 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 ARNTL2Q8WYA1 636 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 TTLL2Q9BWV7 592 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 IGFLR1Q9H665 355 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 PLEKHA5Q9HAU0 1116 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 DPP3Q9NY33 737 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 NINJ2Q9NZG7 142 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 GIMAP2Q9UG22 337 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 ITGA11Q9UKX5 1188 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms