RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 NR2E3Q9Y5X4 410 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 HS3ST4Q9Y661 456 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 RPS6KL1Q9Y6S9 549 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 CAPN7Q9Y6W3 813 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 GOLGA8RI6L899 631 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 JCHAINP01591 159 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 SERPINB4P48594 390 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 DDR2Q16832 855 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 GALNTL6Q49A17 601 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 CGB2Q6NT52 195 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 ANKRD33Q7Z3H0 272 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 CEP57Q86XR8 500 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 TP53INP2Q8IXH6 220 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 CCDC63Q8NA47 563 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 OR52K1Q8NGK4 314 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 TTPALQ9BTX7 342 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 CEP41Q9BYV8 373 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 GMIPQ9P107 970 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 SLC17A7Q9P2U7 560 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 SOX13Q9UN79 622 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 SNX10Q9Y5X0 201 aa17.64■□□□□ 0.42
TRAPPC11-204ENST00000505676 SRCAPQ6ZRS2 3230 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 IGLV3-10A0A075B6K4 115 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 ANKRD65E5RJM6 399 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 DFFAO00273 331 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 MAFKO60675 156 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 GLRA3O75311 464 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 GALTP07902 379 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 CSE1LP55060 971 aaKnown RBP17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 FAM47EQ6ZV65 393 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 RASSF3Q86WH2 238 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 PDZD8Q8NEN9 1154 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 ISL2Q96A47 359 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 MLPHQ9BV36 600 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 GPR62Q9BZJ7 368 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 ZYG11BQ9C0D3 744 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 MRM3Q9HC36 420 aaKnown RBP17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 GLOD4Q9HC38 313 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 ENTPD7Q9NQZ7 604 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 TMEM248Q9NWD8 314 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 DCDC2Q9UHG0 476 aa17.64■□□□□ 0.41
TRAPPC11-204ENST00000505676 MSI1O43347 362 aaKnown RBP17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 SPRP35270 261 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 VEGFBP49765 207 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 CDK18Q07002 472 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 TOX2Q96NM4 488 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 FAM111AQ96PZ2 611 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 TTLL2Q9BWV7 592 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 TANC1Q9C0D5 1861 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 PRDM5Q9NQX1 630 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 TRIM17Q9Y577 477 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 BACE2Q9Y5Z0 518 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 PIAS1O75925 651 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 NEBLO76041 1014 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 IGLV3-27P01718 113 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 NEFHP12036 1026 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 TNK2Q07912 1038 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 CCDC91Q7Z6B0 441 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 CELF6Q96J87 481 aaKnown RBP17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 KLF6Q99612 283 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 TSSK1BQ9BXA7 367 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 SLC39A8Q9C0K1 460 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 OSER1Q9NX31 292 aa17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 HBS1LQ9Y450 684 aaKnown RBP17.63■□□□□ 0.41
TRAPPC11-204ENST00000505676 ZDHHC11BP0C7U3 371 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 TUFMP49411 452 aaKnown RBP17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 ILF2Q12905 390 aaKnown RBP17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 HNRNPDQ14103 355 aaKnown RBP17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 ANKRD20A4Q4UJ75 823 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 POTEHQ6S545 545 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 OTOAQ7RTW8 1153 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 NDUFAF2Q8N183 169 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 KIFC1Q9BW19 673 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 TRIM55Q9BYV6 548 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 UBE2OQ9C0C9 1292 aaKnown RBP17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 TBKBP1A7MCY6 615 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 C2CD2LO14523 706 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 TIMM44O43615 452 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 ATP5BP06576 529 aaKnown RBP17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 POLD2P49005 469 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 RENBPP51606 427 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 BNIP1Q12981 228 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 MPP3Q13368 585 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 MGAT5BQ3V5L5 792 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 TTC31Q49AM3 519 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 ARTNQ5T4W7 220 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 PDPK2PQ6A1A2 396 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 LCA5Q86VQ0 697 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 ZNF683Q8IZ20 524 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 ATAD1Q8NBU5 361 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 GABPB2Q8TAK5 448 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 NSMCE1Q8WV22 266 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 ZNF669Q96BR6 464 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 TBL1YQ9BQ87 522 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 UNC93B1Q9H1C4 597 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 VPS45Q9NRW7 570 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 ABCF3Q9NUQ8 709 aa17.62■□□□□ 0.41
TRAPPC11-204ENST00000505676 MARCH2Q9P0N8 246 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms