RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 XPO7Q9UIA9 1087 aaKnown RBP7.12□□□□□ -1.27
NPIPB3-203ENST00000504841 TPX2Q9ULW0 747 aaKnown RBP7.12□□□□□ -1.27
NPIPB3-203ENST00000504841 PCDHA7Q9UN72 937 aa7.12□□□□□ -1.27
NPIPB3-203ENST00000504841 TRAF3IP3Q9Y228 551 aa7.12□□□□□ -1.27
NPIPB3-203ENST00000504841 HEMK1Q9Y5R4 338 aaPredicted RBP7.12□□□□□ -1.27
NPIPB3-203ENST00000504841 ASH1LQ9NR48 2969 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 COL6A6A6NMZ7 2263 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 ARID1BQ8NFD5 2236 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 CPED1A4D0V7 1026 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 C1QTNF3-AMACRE9PGA6 284 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 PRAMEF26H0Y7S4 382 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 M0QYV0 167 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 O00370 1275 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 MAPK13O15264 365 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 PLRG1O43660 514 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 PIAS2O75928 621 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 NEBLO76041 1014 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 APOEP02649 317 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 LTFP02788 710 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 SETSIPP0DME0 302 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 ALPPL2P10696 532 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 PDGFRAP16234 1089 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 ZNF18P17022 549 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 DGKAP23743 735 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 BRD2P25440 801 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 RPL13P26373 211 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 RBMS1P29558 406 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 GTF2H1P32780 548 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 LSSP48449 732 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 ERVPABLB-1P60509 514 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 NUCB2P80303 420 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 CNTN1Q12860 1018 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 OVGP1Q12889 678 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 NFATC3Q12968 1075 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 ADAM9Q13443 819 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 CUL2Q13617 745 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 ARID5BQ14865 1188 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 ZSCAN23Q3MJ62 389 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 SETMARQ53H47 684 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 TCERG1LQ5VWI1 586 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 RAP1GAP2Q684P5 730 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 CRTC1Q6UUV9 634 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 Q6ZVU0 165 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 DSG4Q86SJ6 1040 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 TAC4Q86UU9 113 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 IQCHQ86VS3 1027 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 FBXL13Q8NEE6 735 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 OR13H1Q8NG92 308 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 IFI44Q8TCB0 444 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 DQX1Q8TE96 717 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 TMEM174Q8WUU8 243 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 OR8D1Q8WZ84 308 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 CCDC47Q96A33 483 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 FAM149B1Q96BN6 582 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 MED8Q96G25 268 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 WBP1Q96G27 269 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 APOLD1Q96LR9 279 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 SERPINB11Q96P15 392 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 SPAG5Q96R06 1193 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 ASCL3Q9NQ33 180 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 ARHGAP20Q9P2F6 1191 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 SARDHQ9UL12 918 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 SATB2Q9UPW6 733 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 DMTF1Q9Y222 760 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 BPTFQ12830 3046 aa7.11□□□□□ -1.27
NPIPB3-203ENST00000504841 A0A1W2PQU0 124 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 PMS2P1A4D2B8 440 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 C10orf142B7Z368 130 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 F5H5T6 163 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 SLC7A4O43246 635 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 RNGTTO60942 597 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 DXOO77932 396 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 CALCAP01258 141 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 EPB41P11171 864 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 VDRP11473 427 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 CKMT1AP12532 417 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 TACR2P21452 398 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 CLDN2P57739 230 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 YWHAEP62258 255 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 NFKB2Q00653 900 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 KCNMA1Q12791 1236 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 CDKN3Q16667 212 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 ISXQ2M1V0 245 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 CBWD6Q4V339 395 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 CBWD3Q5JTY5 395 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 CBWD5Q5RIA9 395 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 AGBL4Q5VU57 503 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 FAM46CQ5VWP2 391 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 CDCP2Q5VXM1 449 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 OR6B2Q6IFH4 312 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 PMF1Q6P1K2 205 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 TMEM270Q6UE05 265 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 CCDC81Q6ZN84 652 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 PTAR1Q7Z6K3 402 aaPredicted RBP7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 TRIM69Q86WT6 500 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 KDM1BQ8NB78 822 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 KCTD13Q8WZ19 329 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 IRGQQ8WZA9 623 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 TFAP2BQ92481 460 aa7.1□□□□□ -1.27
NPIPB3-203ENST00000504841 ARRDC3Q96B67 414 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms