RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ARHGAP40Q5TG30 622 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 SHEQ5VZ18 495 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 LRRC8DQ7L1W4 858 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 KRT28Q7Z3Y7 464 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 WDR5BQ86VZ2 330 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 MAML2Q8IZL2 1156 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-204ENST00000504430 LILRB4Q8NHJ6 448 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 SETD6Q8TBK2 473 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 DHX58Q96C10 678 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 FAM118BQ9BPY3 351 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 SIKE1Q9BRV8 207 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 NUP85Q9BW27 656 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 SCNM1Q9BWG6 230 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 MVB12BQ9H7P6 319 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 SUGCTQ9HAC7 445 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.4□□□□□ -1.545e-7■■■■■ 27.1
NIPBL-204ENST00000504430 TSPYL4Q9UJ04 414 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 VAV3Q9UKW4 847 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 PALD1Q9ULE6 856 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 NENFQ9UMX5 172 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 LIPT1Q9Y234 373 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 CAPN7Q9Y6W3 813 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 ZNF785A8K8V0 405 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 MAPK13O15264 365 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 ZSCAN9O15535 394 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-204ENST00000504430 DNAJB6O75190 326 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 VNN2O95498 520 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 AK1P00568 194 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 GRPP07492 148 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 MSX2P35548 267 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-204ENST00000504430 SREBF1P36956 1147 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 CDKN1AP38936 164 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 ADCY8P40145 1251 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 PLTPP55058 493 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 SF3A3Q12874 501 aaKnown RBP eCLIP5.4□□□□□ -1.54
NIPBL-204ENST00000504430 COL9A3Q14050 684 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-204ENST00000504430 MORF4L2Q15014 288 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 AAK1Q2M2I8 961 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 PLEKHS1Q5SXH7 462 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 CACHD1Q5VU97 1274 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 PLAG1Q6DJT9 500 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 INO80CQ6PI98 192 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-204ENST00000504430 HTR3DQ70Z44 454 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 DNAAF5Q86Y56 855 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 ADGRF2Q8IZF7 708 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 MFSD4AQ8N468 514 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 POMGNT2Q8NAT1 580 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 AZIN2Q96A70 460 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 RRNAD1Q96FB5 475 aaKnown RBP5.4□□□□□ -1.54
NIPBL-204ENST00000504430 INTS4Q96HW7 963 aaKnown RBP5.4□□□□□ -1.54
NIPBL-204ENST00000504430 RIOK1Q9BRS2 568 aaKnown RBP5.4□□□□□ -1.54
NIPBL-204ENST00000504430 RHBGQ9H310 441 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 CHRNA9Q9UGM1 479 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 HPSEQ9Y251 543 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 HCFC2Q9Y5Z7 792 aa5.4□□□□□ -1.54
NIPBL-204ENST00000504430 SYNGAP1Q96PV0 1343 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 A0A1W2PQF6 199 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 TCRBV7S2A1N4TA0A589 114 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 GNAT3A8MTJ3 354 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 TMCO5BA8MYB1 307 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 GRM8O00222 908 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 HGSO14964 777 aaPredicted RBP5.4□□□□□ -1.55
NIPBL-204ENST00000504430 LY86O95711 162 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 EFEMP2O95967 443 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 SRFP11831 508 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 JAK1P23458 1154 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 PTBP1P26599 531 aaKnown RBP eCLIP5.4□□□□□ -1.553e-6■■■■■ 30.2
NIPBL-204ENST00000504430 MRPL12P52815 198 aaKnown RBP5.4□□□□□ -1.55
NIPBL-204ENST00000504430 SLC29A2Q14542 456 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 SLC39A14Q15043 492 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 RRS1Q15050 365 aaKnown RBP5.4□□□□□ -1.55
NIPBL-204ENST00000504430 SLC5A9Q2M3M2 681 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 C15orf59Q2T9L4 293 aaPredicted RBP5.4□□□□□ -1.55
NIPBL-204ENST00000504430 ANKRD20A4Q4UJ75 823 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 ANKRD20A8PQ5CZ79 823 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 PRRT3Q5FWE3 981 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 ANKRD20A2Q5SQ80 823 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 C6orf163Q5TEZ5 329 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 ANKRD20A1Q5TYW2 823 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 STRIP1Q5VSL9 837 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 ANKRD20A3Q5VUR7 823 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 LINC00696Q6ZRV3 163 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 RDM1Q8NG50 284 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 CCDC110Q8TBZ0 833 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 THRSPQ92748 146 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 TTYH3Q9C0H2 523 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 CLPBQ9H078 707 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 CARD9Q9H257 536 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 WDCPQ9H6R7 721 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 SIRT3Q9NTG7 399 aaPredicted RBP5.4□□□□□ -1.55
NIPBL-204ENST00000504430 FAM212BQ9NTI7 297 aaPredicted RBP5.4□□□□□ -1.55
NIPBL-204ENST00000504430 TMOD3Q9NYL9 352 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 NDUFAF4Q9P032 175 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 DBR1Q9UK59 544 aaKnown RBP5.4□□□□□ -1.55
NIPBL-204ENST00000504430 ADAMTS6Q9UKP5 1117 aa5.4□□□□□ -1.55
NIPBL-204ENST00000504430 DDX49Q9Y6V7 483 aaKnown RBP5.4□□□□□ -1.55
NIPBL-204ENST00000504430 TRAV6A0A075B6T7 132 aa5.39□□□□□ -1.55
NIPBL-204ENST00000504430 A0A087WWL8 130 aa5.39□□□□□ -1.55
NIPBL-204ENST00000504430 PNMA6EA0A0J9YXQ4 647 aa5.39□□□□□ -1.55
NIPBL-204ENST00000504430 ZNF185O15231 689 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms