RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SNTG1Q9NSN8 517 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF282Q9UDV7 671 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 DNAJC12Q9UKB3 198 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SLC22A14Q9Y267 594 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ORC6Q9Y5N6 252 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SPACA6W5XKT8 324 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PLOD2O00469 737 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 FOXP2O15409 715 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PJA2O43164 708 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PFKFB2O60825 505 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 GCNT3O95395 438 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PLATP00750 562 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ASNSP08243 561 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 MLNP12872 115 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 JUPP14923 745 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 S100PP25815 95 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 USP14P54578 494 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RTP1P59025 263 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 LSAMPQ13449 338 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 DHCR24Q15392 516 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PLEKHG4Q58EX7 1191 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 EMBQ6PCB8 327 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SLFN11Q7Z7L1 901 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 WDR49Q8IV35 697 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TUSC5Q8IXB3 177 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 WASF1Q92558 559 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 REPS1Q96D71 796 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 HGH1Q9BTY7 390 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 REXO4Q9GZR2 422 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 DDX47Q9H0S4 455 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PANK4Q9NVE7 773 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PI4KBQ9UBF8 816 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 DBF4Q9UBU7 674 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 BLMP54132 1417 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 A0A0A0MRY4 1105 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 M0R036 132 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 FOXO3O43524 673 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 PGRP06401 933 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 CKMP06732 381 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 RETP07949 1114 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 RD3LP0DJH9 198 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ERVK-10P10266 1014 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 CCR4P51679 360 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ROR1Q01973 937 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 MLIPQ5VWP3 458 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 RHPN2Q8IUC4 686 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 CRACR2BQ8N4Y2 399 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 PPP1R13LQ8WUF5 828 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 PROX1Q92786 737 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 CLPTM1LQ96KA5 538 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ADAD1Q96M93 576 aaKnown RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ASB16Q96NS5 453 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 LRRC37BQ96QE4 947 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ARMC7Q9H6L4 198 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 CD93Q9NPY3 652 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 NIT2Q9NQR4 276 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ADPRHL2Q9NX46 363 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 KDRP35968 1356 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 POLR1CO15160 346 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 KHDRBS3O75525 346 aaKnown RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 TJP3O95049 919 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 GOSR1O95249 250 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 RPS17P08708 135 aaKnown RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 PDGFRAP16234 1089 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 GALP22466 123 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 HNRNPFP52597 415 aaKnown RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF846Q147U1 533 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 IFI44LQ53G44 452 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 MZT2AQ6P582 158 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 TTC33Q6PID6 262 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 SARM1Q6SZW1 724 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ERN2Q76MJ5 926 aaKnown RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 PIWIL4Q7Z3Z4 852 aaKnown RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 THAP5Q7Z6K1 395 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 GALNT5Q7Z7M9 940 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ITIH5Q86UX2 942 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 MB21D2Q8IYB1 491 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF561Q8N587 486 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 SH2D3CQ8N5H7 860 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 KDF1Q8NAX2 398 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF384Q8TF68 577 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 RFT1Q96AA3 541 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF560Q96MR9 790 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 TINAGL1Q9GZM7 467 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 LRRC19Q9H756 370 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 UPB1Q9UBR1 384 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ZFP69BQ9UJL9 534 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 EIF3LQ9Y262 564 aaKnown RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 IFT52Q9Y366 437 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 RNF17Q9BXT8 1623 aaKnown RBP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 ARHGEF35A5YM69 484 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 PSTPIP1O43586 416 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 PLOD3O60568 738 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 INHBAP08476 426 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 CCNA2P20248 432 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 NR2F2P24468 414 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 PCGF2P35227 344 aa6.35□□□□□ -1.39
CLCN3-204ENST00000504131 FXR2P51116 673 aaKnown RBP eCLIP6.35□□□□□ -1.39
CLCN3-204ENST00000504131 SLC34A1Q06495 639 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms