RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ADAM28Q9UKQ2 775 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 AP3M1Q9Y2T2 418 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 ADM5C9JUS6 153 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 TPP1O14773 563 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 SPTLC1O15269 473 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 ERVK-10P10266 1014 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 CDCA5Q96FF9 252 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 RMND5BQ96G75 393 aaPredicted RBP16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 ARMCX1Q9P291 453 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 PCDHA11Q9Y5I1 949 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 TNPO3Q9Y5L0 923 aaKnown RBP16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 RIC1Q4ADV7 1423 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 H3BMM5 538 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 PDE2AO00408 941 aaPredicted RBP16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 TRUB2O95900 331 aaKnown RBP16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 NPR3P17342 541 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 BMP6P22004 513 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 BOP1Q14137 746 aaKnown RBP16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 C15orf59Q2T9L4 293 aaPredicted RBP16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 TTMPQ5BVD1 217 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 ZCCHC8Q6NZY4 707 aaKnown RBP16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 TRAF7Q6Q0C0 670 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 UROC1Q96N76 676 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 GAD1Q99259 594 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 PCDH8O95206 1070 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 CBX6O95503 412 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 ITGAVP06756 1048 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 POLR2LP62875 67 aaKnown RBP16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 AADACL2Q6P093 401 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 TMEM132CQ8N3T6 1108 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 SPPL2AQ8TCT8 520 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 ACTRT2Q8TDY3 377 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 CDRT15Q96T59 188 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 CATSPERZQ9NTU4 200 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 USP12O75317 370 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 PIGNO95427 931 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 KRT75O95678 551 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 BMT2Q1RMZ1 405 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 LRRC74BQ6ZQY2 392 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 FAM183BPQ6ZVS7 135 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 SVOPQ8N4V2 548 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 ZNF557Q8N988 423 aaPredicted RBP16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 MAGED4Q96JG8 741 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 HGH1Q9BTY7 390 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 THG1LQ9NWX6 298 aaKnown RBP16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 MARCH2Q9P0N8 246 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 A0A0B4J269 797 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 TNFAIP8O95379 198 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 FMO4P31512 558 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 PURAQ00577 322 aaKnown RBP16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 BTG3Q14201 252 aaPredicted RBP16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 DDR2Q16832 855 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 SLC44A4Q53GD3 710 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 ARMCX4Q5H9R4 360 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 FAM228AQ86W67 206 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 SETD9Q8NE22 299 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 STK32AQ8WU08 396 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 COPG2Q9UBF2 871 aa16.8■□□□□ 0.28
PCDHA1-203ENST00000504120 CLOCKO15516 846 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 TBC1D12O60347 775 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 PSMB4P28070 264 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 HNRNPH3P31942 346 aaKnown RBP16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 GPSM1Q86YR5 675 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 RNF157Q96PX1 679 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 ADPRHL2Q9NX46 363 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 CCDC167Q9P0B6 97 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 ZNF112Q9UJU3 913 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 SNX8Q9Y5X2 465 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 PDZK1P1A8MUH7 402 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 BMP10O95393 424 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 RPN2P04844 631 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 NFICP08651 508 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 RTP1P59025 263 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 IL2P60568 153 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 FMO1Q01740 532 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 AUHQ13825 339 aaKnown RBP16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 IL17AQ16552 155 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 PLPPR4Q7Z2D5 763 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 POLNQ7Z5Q5 900 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 CDK20Q8IZL9 346 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 DLG3Q92796 817 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 ART4Q93070 314 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 ZFRQ96KR1 1074 aaKnown RBP16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 ACO2Q99798 780 aaKnown RBP16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 C9orf16Q9BUW7 83 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 OSBPL10Q9BXB5 764 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 OPTCQ9UBM4 332 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 VPS51Q9UID3 782 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 ATG7O95352 703 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 PAX3P23760 479 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 KLRC2P26717 231 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 ALDH9A1P49189 494 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 VGLL4Q14135 290 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 MAP1SQ66K74 1059 aaPredicted RBP16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 SEMA4DQ92854 862 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 ADAM2Q99965 735 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 LIMD1Q9UGP4 676 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 ADAM30Q9UKF2 790 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 CARNS1A5YM72 827 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 EIF2S1P05198 315 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms