RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 PAFAH2Q99487 392 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 SORT1Q99523 831 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 POP1Q99575 1024 aaKnown RBP6.09□□□□□ -1.43
LINC01340-201ENST00000504012 GDF15Q99988 308 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 C17orf62Q9BQA9 187 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 ZKSCAN3Q9BRR0 538 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 KIFC1Q9BW19 673 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 ACAT2Q9BWD1 397 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 PLA2G12BQ9BX93 195 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 C1QTNF7Q9BXJ2 289 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 NYXQ9GZU5 481 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 ATP13A3Q9H7F0 1226 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 COQ10BQ9H8M1 238 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 COPS7BQ9H9Q2 264 aaPredicted RBP6.09□□□□□ -1.43
LINC01340-201ENST00000504012 POLR1BQ9H9Y6 1135 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 ENAMQ9NRM1 1142 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 CHST7Q9NS84 486 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 HOMER2Q9NSB8 354 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 C20orf96Q9NUD7 363 aaPredicted RBP6.09□□□□□ -1.43
LINC01340-201ENST00000504012 PAK1IP1Q9NWT1 392 aaPredicted RBP6.09□□□□□ -1.43
LINC01340-201ENST00000504012 DUS2Q9NX74 493 aaKnown RBP6.09□□□□□ -1.43
LINC01340-201ENST00000504012 EVLQ9UI08 416 aaPredicted RBP6.09□□□□□ -1.43
LINC01340-201ENST00000504012 SERPINB13Q9UIV8 391 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 ZNF221Q9UK13 617 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 CAB39Q9Y376 341 aaPredicted RBP6.09□□□□□ -1.43
LINC01340-201ENST00000504012 MRPS23Q9Y3D9 190 aaKnown RBP6.09□□□□□ -1.43
LINC01340-201ENST00000504012 RWDD3Q9Y3V2 267 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 A3GALT2U3KPV4 340 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 PLCH1Q4KWH8 1693 aa6.09□□□□□ -1.43
LINC01340-201ENST00000504012 ROBO2Q9HCK4 1378 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 KIF1AQ12756 1690 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 DENND3A2RUS2 1198 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 RGSL1A5PLK6 1076 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 SMCO2A6NFE2 343 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 GRXCR2A6NFK2 248 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 TRPC5OSA6NMA1 111 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 E5RJQ4 531 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 TRIM38O00635 465 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 COPEO14579 308 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 TRDMT1O14717 391 aaKnown RBP6.08□□□□□ -1.44
LINC01340-201ENST00000504012 TNFRSF10BO14763 440 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 RIMBP2O15034 1052 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 PMM2O15305 246 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 CLDN3O15551 220 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 PHGDHO43175 533 aaKnown RBP6.08□□□□□ -1.44
LINC01340-201ENST00000504012 PAPSS1O43252 624 aaPredicted RBP6.08□□□□□ -1.44
LINC01340-201ENST00000504012 CCNT1O60563 726 aaKnown RBP6.08□□□□□ -1.44
LINC01340-201ENST00000504012 UGT2B11O75310 529 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 MAFO75444 373 aaPredicted RBP6.08□□□□□ -1.44
LINC01340-201ENST00000504012 DAB1O75553 588 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 CCNKO75909 580 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 OLFM2O95897 454 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 CD4P01730 458 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 BPGMP07738 259 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 SNRPAP09012 282 aaKnown RBP6.08□□□□□ -1.44
LINC01340-201ENST00000504012 ZNF182P17025 639 aaPredicted RBP6.08□□□□□ -1.44
LINC01340-201ENST00000504012 CRHR1P34998 444 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 PTPN7P35236 360 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 NR4A2P43354 598 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 MARCKSL1P49006 195 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 HCAR3P49019 387 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 MAPKAPK2P49137 400 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 PRKAA2P54646 552 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 GPX6P59796 221 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 TMPRSS15P98073 1019 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 OTUD4Q01804 1114 aaKnown RBP6.08□□□□□ -1.44
LINC01340-201ENST00000504012 RHDQ02161 417 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 TNFAIP2Q03169 654 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 GBE1Q04446 702 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 CETN1Q12798 172 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 BNIP2Q12982 314 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 SCARF1Q14162 830 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 MESDQ14696 234 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 DGUOKQ16854 277 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 KNOP1Q1ED39 458 aaKnown RBP6.08□□□□□ -1.44
LINC01340-201ENST00000504012 TYSND1Q2T9J0 566 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 SLC36A3Q495N2 470 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 LRRC24Q50LG9 513 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 CEP55Q53EZ4 464 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 FAM47AQ5JRC9 791 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 CLVS2Q5SYC1 327 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 CCNYL2Q5T2Q4 361 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 LDLRAD1Q5T700 205 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 RNASEH2BQ5TBB1 312 aaKnown RBP6.08□□□□□ -1.44
LINC01340-201ENST00000504012 C12orf60Q5U649 245 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 KRT79Q5XKE5 535 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 FBXO31Q5XUX0 539 aaPredicted RBP6.08□□□□□ -1.44
LINC01340-201ENST00000504012 FAM205BPQ63HN1 556 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 LETMD1Q6P1Q0 360 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 GGT6Q6P531 493 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 TIFABQ6ZNK6 161 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 KCTD8Q6ZWB6 473 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 VN1R5Q7Z5H4 357 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 LINC00523Q86TU6 105 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 SLC22A16Q86VW1 577 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 ZNF677Q86XU0 584 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 WDR49Q8IV35 697 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 UNC45BQ8IWX7 931 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 PM20D2Q8IYS1 436 aa6.08□□□□□ -1.44
LINC01340-201ENST00000504012 TBC1D21Q8IYX1 336 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms