RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 RPS6KA3P51812 740 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 USP4Q13107 963 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 PRKAA1Q13131 559 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 LRRC36Q1X8D7 754 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 TCHHL1Q5QJ38 904 aaPredicted RBP15.29■□□□□ 0.04
SNF8-203ENST00000504000 SLC27A1Q6PCB7 646 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 GADL1Q6ZQY3 521 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 PID1Q7Z2X4 250 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 TICAM1Q8IUC6 712 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 TNS4Q8IZW8 715 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 CCNYQ8ND76 341 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 ADCY4Q8NFM4 1077 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 KCTD13Q8WZ19 329 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 DGCR14Q96DF8 476 aaKnown RBP15.29■□□□□ 0.04
SNF8-203ENST00000504000 VAT1Q99536 393 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 GATA5Q9BWX5 397 aaPredicted RBP15.29■□□□□ 0.04
SNF8-203ENST00000504000 IL22Q9GZX6 179 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 DPEP3Q9H4B8 488 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 GPRC5DQ9NZD1 345 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 RBPJLQ9UBG7 517 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 UBQLN1Q9UMX0 589 aaKnown RBP15.29■□□□□ 0.04
SNF8-203ENST00000504000 NR2E3Q9Y5X4 410 aa15.29■□□□□ 0.04
SNF8-203ENST00000504000 PPEF2O14830 753 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 AP1G2O75843 785 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 FAM163BP0C2L3 166 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 COL6A2P12110 1019 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 HSPA13P48723 471 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 ZNF135P52742 658 aaPredicted RBP15.28■□□□□ 0.04
SNF8-203ENST00000504000 PPIDQ08752 370 aaKnown RBP15.28■□□□□ 0.04
SNF8-203ENST00000504000 SCAPQ12770 1279 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 PIGGQ5H8A4 983 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 FBXO47Q5MNV8 452 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 RARS2Q5T160 578 aaKnown RBP15.28■□□□□ 0.04
SNF8-203ENST00000504000 OTUD1Q5VV17 481 aaPredicted RBP15.28■□□□□ 0.04
SNF8-203ENST00000504000 LIPMQ5VYY2 423 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 ZYG11AQ6WRX3 759 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 TMC7Q7Z402 723 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 OR52K1Q8NGK4 314 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 MAPK15Q8TD08 544 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 ZNF669Q96BR6 464 aaPredicted RBP15.28■□□□□ 0.04
SNF8-203ENST00000504000 TNIP3Q96KP6 325 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 SLC2A13Q96QE2 648 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 HNRNPABQ99729 332 aaKnown RBP15.28■□□□□ 0.04
SNF8-203ENST00000504000 R3HDMLQ9H3Y0 253 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 SETD4Q9NVD3 440 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 CNOT11Q9UKZ1 510 aaKnown RBP15.28■□□□□ 0.04
SNF8-203ENST00000504000 INPP5FQ9Y2H2 1132 aa15.28■□□□□ 0.04
SNF8-203ENST00000504000 RBM47A0AV96 593 aaKnown RBP15.27■□□□□ 0.04
SNF8-203ENST00000504000 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.27■□□□□ 0.04
SNF8-203ENST00000504000 E9PBE3 544 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 KLHL41O60662 606 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 CYP2B6P20813 491 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 PTPN3P26045 913 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 ADORA2BP29275 332 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 HOXA11P31270 313 aaPredicted RBP15.27■□□□□ 0.04
SNF8-203ENST00000504000 PPARGP37231 505 aaPredicted RBP15.27■□□□□ 0.04
SNF8-203ENST00000504000 RGS2P41220 211 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 GRIA2P42262 883 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 RPL5P46777 297 aaKnown RBP15.27■□□□□ 0.04
SNF8-203ENST00000504000 MPP3Q13368 585 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 ZNF423Q2M1K9 1284 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 USP41Q3LFD5 358 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 SH2D4BQ5SQS7 431 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 BSPRYQ5W0U4 402 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 SEL1L3Q68CR1 1132 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 KLHDC8BQ8IXV7 354 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 DSELQ8IZU8 1212 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 PGAM4Q8N0Y7 254 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 TMEM151AQ8N4L1 468 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 PDCD6IPQ8WUM4 868 aaKnown RBP15.27■□□□□ 0.04
SNF8-203ENST00000504000 ZNF560Q96MR9 790 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 OR52B2Q96RD2 323 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 GPR22Q99680 433 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 PDGFCQ9NRA1 345 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 SNTG2Q9NY99 539 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 KLHL8Q9P2G9 620 aaPredicted RBP15.27■□□□□ 0.04
SNF8-203ENST00000504000 TUBGCP4Q9UGJ1 667 aa15.27■□□□□ 0.04
SNF8-203ENST00000504000 C15orf38-AP3S2A0A0A6YYH1 394 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 GOLGA8QA0A0J9YX86 632 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 GOLGA8OA6NCC3 632 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 GOLGA8NF8WBI6 632 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 EEF2KO00418 725 aaKnown RBP15.27■□□□□ 0.03
SNF8-203ENST00000504000 DNAJA2O60884 412 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 SEMA3BQ13214 749 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 BIRC2Q13490 618 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 CYLC2Q14093 348 aaPredicted RBP15.27■□□□□ 0.03
SNF8-203ENST00000504000 MAP7Q14244 749 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 ANO4Q32M45 955 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 GRAMD1BQ3KR37 738 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 ITPRIPL1Q6GPH6 555 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 FBXL19Q6PCT2 694 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 BNC2Q6ZN30 1099 aaPredicted RBP15.27■□□□□ 0.03
SNF8-203ENST00000504000 ARPINQ7Z6K5 226 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 AHI1Q8N157 1196 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 CNTD1Q8N815 330 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 SHCBP1Q8NEM2 672 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 SLC2A14Q8TDB8 520 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 WNT8BQ93098 351 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 DCUN1D1Q96GG9 259 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 ZFRQ96KR1 1074 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms