RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 C15orf38-AP3S2A0A0A6YYH1 394 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 RBAK-RBAKDNI3L0D1 243 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 INPP4BO15327 924 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 CNOT3O75175 753 aaKnown RBP16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 SCNN1GP51170 649 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 ECM1Q16610 540 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 FAM110CQ1W6H9 321 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 ARPINQ7Z6K5 226 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 ATG16L2Q8NAA4 619 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 RSPH1Q8WYR4 309 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 MAGED4Q96JG8 741 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 SPATA13Q96N96 652 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 USE1Q9NZ43 259 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 SNUPNO95149 360 aaKnown RBP16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 MYL4P12829 197 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 RPL22P35268 128 aaKnown RBP16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 MARCKSL1P49006 195 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 SLC39A12Q504Y0 691 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 USP6NLQ92738 828 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 SEPHS2Q99611 448 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 SYBUQ9NX95 663 aa16.44■□□□□ 0.22
HMGXB3-202ENST00000503427 MLH1P40692 756 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 GRM5P41594 1212 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 ZNF284Q2VY69 593 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 DUSP28Q4G0W2 176 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 NAIF1Q69YI7 327 aaPredicted RBP16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 PPP4R4Q6NUP7 873 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 ANKRD23Q86SG2 305 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 RNF208Q9H0X6 261 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 CDH9Q9ULB4 789 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 A0A1B0GW55 424 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 TPP1O14773 563 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 PIGNO95427 931 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 CPSF4O95639 269 aaKnown RBP16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 DUX4L2P0CJ85 424 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 DUX4L3P0CJ86 424 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 DUX4L4P0CJ87 422 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 DUX4L5P0CJ88 424 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 DUX4L6P0CJ89 424 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 DUX4L7P0CJ90 424 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 BDNFP23560 247 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 FRG1Q14331 258 aaKnown RBP16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 POLNQ7Z5Q5 900 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 NET1Q7Z628 596 aaPredicted RBP16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 EXOC3L1Q86VI1 746 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 OR56A4Q8NGH8 313 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 FTHL17Q9BXU8 183 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 IL22Q9GZX6 179 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 SAE1Q9UBE0 346 aaPredicted RBP16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 DUX4Q9UBX2 424 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 AFDNP55196 1824 aaKnown RBP16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 IGKV6D-41A0A0C4DH26 115 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 CCDC85CA6NKD9 419 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 MAP3K13O43283 966 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 NPR3P17342 541 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 KRT20P35900 424 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 CDC16Q13042 620 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 DGKZQ13574 1117 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 PRAMEF19Q5SWL8 479 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 LRRC52Q8N7C0 313 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 C9orf16Q9BUW7 83 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 TBC1D10AQ9BXI6 508 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 XRN1Q8IZH2 1706 aaKnown RBP16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 OR1E1P30953 314 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 RPL9P32969 192 aaKnown RBP16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 WSCD1Q658N2 575 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 BBS12Q6ZW61 710 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 CYP4Z1Q86W10 505 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 PSTKQ8IV42 348 aaKnown RBP16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 IQCKQ8N0W5 287 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 RNF148Q8N7C7 305 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 SLC7A5P2Q9GIP4 190 aa16.43■□□□□ 0.22
HMGXB3-202ENST00000503427 RAD51BO15315 384 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 RNASEH1O60930 286 aaKnown RBP16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 CAMK2GQ13555 558 aaPredicted RBP16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 C16orf46Q6P387 395 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 IRF2BP1Q8IU81 584 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 PGLYRP2Q96PD5 576 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 POMKQ9H5K3 350 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 CCDC167Q9P0B6 97 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 ADAM28Q9UKQ2 775 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 GLTPD2A6NH11 291 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 HALP42357 657 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 IL5RAQ01344 420 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 IKBKEQ14164 716 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 TRAF7Q6Q0C0 670 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 ARCQ7LC44 396 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 FNDC5Q8NAU1 212 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 LPCAT1Q8NF37 534 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 MPP4Q96JB8 637 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 CDHR5Q9HBB8 845 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 RPL26L1Q9UNX3 145 aaKnown RBP16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 DYRK1BQ9Y463 629 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 PCDHA11Q9Y5I1 949 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 COPG1Q9Y678 874 aaKnown RBP16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 CCDC154A6NI56 674 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 GUCA1CO95843 209 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 BCL10O95999 233 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 CHKAP35790 457 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 DOLKQ9UPQ8 538 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms